LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun3g02539	ATGATGGGTCTCTTGACGAATCTTCGAGGCTTGAGAACAGAGGGCACCCAACAAGAGAGCTTACCCGTTTTGGCTACGGGTGGCAACCCAAAGAGGAAATGGAACAATCTAATGCCTCTTGTGGTTGCCCTTGTGGTCATCGCGGAGATCGCGTTTCTGGGTAGGTTGGATATGGCAAAAAACGCCGCCATGGTTGACTCCCTCGCTGACTTCTTTTACCGCTCTCGAGCGGTCGTTGAAGGTGAAGATTTGGGGTTGGGTTTGGTGGCTTCTGATCGGACTTCTGAATTGGATAGTTGTGAGGAATGGTTGGAGAGGGAGGATGCTGTCACATATTCCAGGGACTTCTCCAAAGAGCCTATTTTTGTTTCTGGAGCTGACCAGGAGTGGAAGTCGTGTTCGGTTGGATGTAAATTTGGGTTTAGTGGGGATAAGAAGCCAGATGCCGCATTTGGGTTACCTCAACCAAGTGGGACAGCTAGTGTTCTGCGATCAATGGAATCAGCAGAATACTATGCTGAGAACAATATTGCCATGGCAAGACGGAGGGGATATAACATTGTAATGACAACTAGTCTATCTTCGGATGTTCCTGTTGGATATTTCTCATGGGCTGAGTATGATATAATGGCACCTGTGCAGCCTAAAACTGAAGCTGCTCTTGCAGCTGCATTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAGGGCCTTGAAAAATCAAACATCAAGATTGATTCTTATGGTGGTTGTCACAGGAACCGTGATGGAAGAGTGAACAAAGTGGAAGCCCTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCGAATGAGGAAGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCAGGACTTTGCTCCTTCTCCTGGTTCAATTTTACATATTAAAGAGATAGAGGATATTGAGTCGGTTGCAAAGACCATGAGATACCTAGCAGAAAATCCCGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGTCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCAGTGCATTCATCCTGCCGCCTCTGCATTCACTTGGCCACAGTGAGTAGAGAGAAGGAAGAAAATAGTCCAAGCTTTAAGAGACGTCCTTGCAAGTGCACTAGAGGGCCAGAAACTGTATATCATATCTATGTCAGAGAAAGGGGAAGGTTTGAGATGGAGTCCATTTACCTGAGGTCTAGCAATTTAACTCTGGATGCTGTGAAGGCTGCTGTTGTTTTGAAGTTCACATCCTTGAATCATGTGCCTGTATGGAAGTCTGAAAGGCCTGAAGTTATAAGAGGGGGGAGTGATTTAAAACTCTACAAAATATACCCAGTTGGCTTGACACAGAGACAAGCTCTTTATACCTTCAGCTTCAAAGGTGATGCAGATTTCAGGAGTCACTTGGAGAACAATCCTTGTGCCAAGTTTGAAGTCATTTTTGTGTAG	1533	0.4488	MMGLLTNLRGLRTEGTQQESLPVLATGGNPKRKWNNLMPLVVALVVIAEIAFLGRLDMAKNAAMVDSLADFFYRSRAVVEGEDLGLGLVASDRTSELDSCEEWLEREDAVTYSRDFSKEPIFVSGADQEWKSCSVGCKFGFSGDKKPDAAFGLPQPSGTASVLRSMESAEYYAENNIAMARRRGYNIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTEAALAAAFISNCGARNFRLQALEGLEKSNIKIDSYGGCHRNRDGRVNKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQDFAPSPGSILHIKEIEDIESVAKTMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKEENSPSFKRRPCKCTRGPETVYHIYVRERGRFEMESIYLRSSNLTLDAVKAAVVLKFTSLNHVPVWKSERPEVIRGGSDLKLYKIYPVGLTQRQALYTFSFKGDADFRSHLENNPCAKFEVIFV	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun3g02539	510	Pfam	Glycosyltransferase family 10 (fucosyltransferase) C-term	220	385	IPR001503	GO:0006486\|GO:0008417\|GO:0016020
	Viun3g02539	510	Gene3D	-	164	359	IPR038577	-
	Viun3g02539	510	FunFam	Glycoprotein 3-alpha-L-fucosyltransferase A	167	359	-	-
	Viun3g02539	510	PANTHER	ALPHA- 1,3 -FUCOSYLTRANSFERASE	44	460	IPR001503	GO:0006486\|GO:0008417\|GO:0016020
	Viun3g02539	510	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	109	384	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun3g02539	2	510	Xyloglucan Fucosyltransferase1	AT3G19280	66.925	0.0	732

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun3g02539	K00753		-	gmx:100792811	909.827