Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02076 ATGGTTTTTCCAAAACCAGCTTCTGAGTCTGACCTTTTTCTTCATTCCAATTTTGCATCTCGCTATGTTAGGGACTCTCTTCCCAGGTTCAGCATGCCTGACGACTCCATGCCTAAGGAGGCTGCCTATCAGAACATTCACGATGAGTTACAGCTTGATGCCATTCCAAAGCTTAATTTGGCTTCCTTCGTGACTACATCCATGGAGGAAGAGTGCAACAAGCTGATCATGGAATCTATCAACAAGAACTACGTGGACATGGACGAATATCCAATCACCACTGATCTTCACAATCGGTGTGTGAACATGATAGCACGTTTGTTCCATGCTGAAATTGGAGAAGATGAGAATGCTATTGGAGCCGGAACAGTTGGCTCATCAGAGGCCATAATGCTGGCAGGGCTGGCATTCAAGAAGAAGTGGCAGAACAAGCGCAAGGCAGAAGGCAAGCCTTATGATAAGCCTAATTTGGTGACTGGCTCCAATGTGCAAGTATGTTGGGAGAAATTTGCGAGATATTTTGAGGTGGAATTGAGGGAAGTGGAGGTGAGAGAAGGATACTACGTTATGGATCCTGCGAAAGCAGTTGAGCTGGTTGATGAGAACACTATTTGTGTGGCTGCAATATTGGGTTCAACTTACAACGGAGAGTTTGAAGATGTGAAGCTCTTGAATGACTTGCTGCTACAAAAGAATAAACAAACTGGATGGGATACACCAATTCATGTGGATGCTGCAAGTGGTGGTTTCATTGCTCCTTTCCTTTATCCAGAGCTGGAGTGGGATTTCAGGCTGGCATTGGTGAAGAGCATAAATGTGAGTGGACACAAGTATGGTCTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGGACAAAGGACGACTTACCCGAAGACCTTGTGTTTCATATCAACTACCTTGGAGCTGACCAACCCACCTTCACCCTCAATTTCTCTAAAGGTCCTTCTTTACAACCTTGTGTTCCATATCATTACATGACACCATGTACTTACCTTGTCACATCTTCACTTACAGGTTCTAGTCAGATCATTGCTCAATACTATCAGCTAATTCGTCTTGGCCAAGAGGGTTATCGAAGCATAATGGAGAACTGCAGAGAAAACGCAATGGTGCTGAAGGAAGATTTGGAGAAGAGTGGGCGCTTTAACATACTCTCAAAAGACGATGGTGTTCCTGTGGTGGCATTTTCTCTGAAAGACCGAAGGCAATACGATGAGTACAAGATATCAGAGATGCTGCGGCGCCATGGTTGGATCGTGCCAGCTTATCCAATGCCACCTGCTGCTCAGCACATAAATGTTCTCCGTGTGGTGATCAGGGCTGAGTTTTCACGCACCCTTGCTGAGCGCCTTGCGTTTGACATACACAATGTGCTGCATGAGCTTGAAAAGGTGCATCCACCCACAAAGACCAATAACACTGAGGAAGTGAACAAGTCCTTGGTTGATTCCGAGGTCAAGAAAACTGCAATGGATACACAGAAGGAAATCATTGCTCAAGAATCCAACAAACGTCAGAAAATCATGGCTTCCTAG 1557 0.4502 MVFPKPASESDLFLHSNFASRYVRDSLPRFSMPDDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARLFHAEIGEDENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLALVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGPSLQPCVPYHYMTPCTYLVTSSLTGSSQIIAQYYQLIRLGQEGYRSIMENCRENAMVLKEDLEKSGRFNILSKDDGVPVVAFSLKDRRQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLAFDIHNVLHELEKVHPPTKTNNTEEVNKSLVDSEVKKTAMDTQKEIIAQESNKRQKIMAS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02076 518 Gene3D - 386 472 - -
Viun3g02076 518 Gene3D - 66 385 IPR015421 GO:0003824
Viun3g02076 518 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 321 IPR002129 GO:0016830|GO:0019752|GO:0030170
Viun3g02076 518 Pfam Pyridoxal-dependent decarboxylase conserved domain 346 406 IPR002129 GO:0016830|GO:0019752|GO:0030170
Viun3g02076 518 FunFam Glutamate decarboxylase 386 473 - -
Viun3g02076 518 FunFam Glutamate decarboxylase 4 65 - -
Viun3g02076 518 NCBIfam glutamate decarboxylase 16 322 IPR010107 GO:0004351|GO:0006536|GO:0030170
Viun3g02076 518 SUPERFAMILY PLP-dependent transferases 16 471 IPR015424 -
Viun3g02076 518 PANTHER GLUTAMATE DECARBOXYLASE 2 323 IPR010107 GO:0004351|GO:0006536|GO:0030170
Viun3g02076 518 Gene3D - 1 65 - -
Viun3g02076 518 FunFam Glutamate decarboxylase 66 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02076 Viun-Chr3 16760381 16762597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02076 1 506 Calmodulin-binding Proteins AT5G17330 71.233 0.0 754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02076 3 16760381 16762597 Viun3g02076 3 16760381 16762597 ECH