Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02026 ATGGAAGGTTTTCACCCTTCAATGACGTCTCCTTTTTCGTACACATTCCCCATCAGTGGTGCTGGAAGTAGTACTACTACTAGCAATCTTACCACTGCCACTTACAGCACTTCTACTATATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAGAGGCTTCTCGACCGTGTAATAGCCTTCCTTCCTCCACCAGCTTTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGCACTTCTCTTCTCCAACACCTTCCTTGAATTATACCTCCAAGTCTCTCCACACCGCCACTGGTTCATATTCTTCAAGCACCACAAAACCCGCAAGAGCTACATCTACAAGAACAACAACAACAACAACGGTAGTGGCTGTGGACATGGTGCAGCCTCTTCCTGTGAAGAAGGGTACCTCTTTGATCCCTCTGACATGGCATGGTACCGTATTTCCTTTGCTTTGGTCCCTTCTGGCTTCTCTCCGGCCTCTTCTTCTGCTGGTTTACTTTGTTGGGTTTCTGACGAGGCTGGTCCCAAGACCATGCTTCTGTGCAACCCTTTGGTCGGTTCTCTCACTCAGTTACCTCCCACGTTGAGACCTAGACTCTTCCCTTCCATTGGCTTAACCATCAGCCCCACCTGCATAGATGTCACTGTTGCCGGGGATGACATGATATCTCCTTATGCAGTGAAGAACTTGACATCTGAAAGCTTTCACATCGATGGAGGAGGGTTTTACTCCTTGTGGGGCACCACCTCTTCTCTGCCTAGGCTTTGCAGCCTTGAATCCGGTCGAATGGTTTACGCTGAAGGGAAGTTTTACTGCATGAATTGCAGCCCTTTCAGCGTTTTGGCTTATGATATCACATCAAACAATTGGTTCAAAATACAAGCCCCAATGAGGAGGTTCCTCAGGTCTCCAAATCTCGTTGAGTGCAAGGGGAAGCTGCTTCTTGTTGCGGCTGTTGAGAAGAGCAAGCTGAACGTGCCAAAGAGTTTGAGGGTGTGGAGTTTGCAGGCTTGTGGGACAATGTGGGTGGAGTCAGAAAGAATGCCACAGCAGCTTTATATTCAGTTTGCTGAATTAGAAGTTGGAAACGGATTTGAATGTGTAGGGCATGGGGAGTTTATTGTGATCATGATTCGTGGCACAGACAAAGCGTTGCTGTTTGATATATGCAGAAAGAGGTGGCAGTGGATTCCACCTTGTCCTTACATTGCACATGATGGCTTTGAATTGCATGGTTTTGCGTATGAACCTAGACTCGCCACTCCTGTCACTGGCCTCCTTGATCAATTGGCTCTTCCCTTCCAGACTTTTACTGCTTAA 1326 0.4751 MEGFHPSMTSPFSYTFPISGAGSSTTTSNLTTATYSTSTIWMNSRIWSKLPQRLLDRVIAFLPPPAFFRARCVCKRWYALLFSNTFLELYLQVSPHRHWFIFFKHHKTRKSYIYKNNNNNNGSGCGHGAASSCEEGYLFDPSDMAWYRISFALVPSGFSPASSSAGLLCWVSDEAGPKTMLLCNPLVGSLTQLPPTLRPRLFPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSLWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDITSNNWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFAELEVGNGFECVGHGEFIVIMIRGTDKALLFDICRKRWQWIPPCPYIAHDGFELHGFAYEPRLATPVTGLLDQLALPFQTFTA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02026 441 Pfam F-box domain 47 81 IPR001810 GO:0005515
Viun3g02026 441 Gene3D - 42 87 - -
Viun3g02026 441 SUPERFAMILY F-box domain 44 125 IPR036047 GO:0005515
Viun3g02026 441 FunFam protein UNUSUAL FLORAL ORGANS 43 87 - -
Viun3g02026 441 PANTHER BNACNNG10540D PROTEIN 41 422 - -
Viun3g02026 441 SMART fbox_2 50 90 IPR001810 GO:0005515
Viun3g02026 441 SUPERFAMILY Galactose oxidase, central domain 71 404 IPR011043 -
Viun3g02026 441 ProSiteProfiles F-box domain profile. 44 93 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02026 Viun-Chr3 16169842 16171933 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02026 3 16169842 16171933 Viun3g02026 3 16169842 16171933 ECH