Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02022 ATGCATTGCAGAAAAAAAAAAAGAGGGAGAGTGCTGTACGTGAGTGAGTACGGTGCGGATCCAAGTGGGAACGAAGAGAGTGGTGATGCCATTTTGAAAGCAGTGGAAGATGCTTTTGGGTTGCAGAAGGGTTCTGAGATGGTTGCAGGGGTGAATGATCTCGGAGGGGTTGTCATTGATTTGGAAGGTGGAAACTACAAAATCAGCAAACCCATTACGTTCCCTTCAGGTGGTGCCAATATTGTGGTAAGAGAAGGAACGTTGAGAGCATCTGATAAATTCCCCGGTGATCGACATCTAGTTGAGTTACGGTCATCAAAGTCTGAGGAACAAGGCGATGGTGGGATTTACTACGAAGACATAACTTTCGCGGACATTCTCTTTGATTCAAGCTACAGAGGAGGAGGATTATTCATCGTTGATTCTGCTAGAATCCGAATCAACAATTGCTTCTTCCTTCACTTCACCACAGAAGGAATTCTTGTCCAGAAAGGACACGAAACCTTCATCACAGATAGCTTTCTTGGACAACACTCAACCGTGGGAGGAGACAGAGACGAGAAGAACTTCTCAGGGGTGGCCATTGATCTTGCTAGCAACGATAATGCAATCACAGATGTTGTGGTTTTCTCAGCAGCCATTGGAGTTGTTCTAAGGGGTCAAGCAAATATTGTAACTGGGGTGCATTGTTATAACAAAGCAACAGGTTTTGGTGGCATAGGGATATTAGTGAAATTGCCTGGTAATTCTCTCACTAGAATTGACAACTGTTACATGGATTACACTGGAATAGTGATGGAAGATCCAGTTCAAGTTCATGTCACAAATGGGTTGTTTCTAGGAGATGCTAATATTGTATTGAAGTCTGTTAAAGGTCAAGTTTTGGGTCTGAATATAGTGAATAACATGTTCAATGGTGACCCCAAAAGGAAGGTTCCTATTGTAAGTCTAGATGGGGAATTCAGTAGCATTGATCAAGTGCTGGTTGATCGCAACCTTGTGAATGGCATGGGCTTGAGATCAACGGTTGGGAAGTTAACTGTCGCTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCATCGCTTTTGGTGTTTCCTAAGAGAATCAGTCATTTTCAGTTTTCATTTTATGCTCAAGATGAGCCTAAATTTGTAGCACTTTCTGCGACCAATGTGTCGGATAACGTTGTTGTTGTGGAGAGTGAGAAAGAAGCAAAAGGGTCTGTTTCCTTCACAGTTGAACAATAA 1248 0.4279 MHCRKKKRGRVLYVSEYGADPSGNEESGDAILKAVEDAFGLQKGSEMVAGVNDLGGVVIDLEGGNYKISKPITFPSGGANIVVREGTLRASDKFPGDRHLVELRSSKSEEQGDGGIYYEDITFADILFDSSYRGGGLFIVDSARIRINNCFFLHFTTEGILVQKGHETFITDSFLGQHSTVGGDRDEKNFSGVAIDLASNDNAITDVVVFSAAIGVVLRGQANIVTGVHCYNKATGFGGIGILVKLPGNSLTRIDNCYMDYTGIVMEDPVQVHVTNGLFLGDANIVLKSVKGQVLGLNIVNNMFNGDPKRKVPIVSLDGEFSSIDQVLVDRNLVNGMGLRSTVGKLTVAGNGTKWVADFSSLLVFPKRISHFQFSFYAQDEPKFVALSATNVSDNVVVVESEKEAKGSVSFTVEQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02022 415 FunFam Polygalacturonase QRT3 14 410 - -
Viun3g02022 415 PANTHER POLYGALACTURONASE QRT3 4 415 IPR039279 GO:0004650
Viun3g02022 415 Gene3D - 14 405 IPR012334 -
Viun3g02022 415 SUPERFAMILY Pectin lyase-like 9 313 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02022 Viun-Chr3 16124318 16126898 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02022 3 16124318 16126898 Viun3g02022 3 16124318 16126898 ECH