Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00181 ATGAGAACCCAACACCTTCGTCTTCACCACCTCCTCCTCACTCTCTTCCTCTTCGCAGCCGCATTATCTCTGGCGTCCTCCGCCGCAGACGAAGCTTCAGCCCCGGTGCCTGACGACGGCGACACCGAGTTCATCCGCTCCAGCTGCAACACCACTCTATACCCTGACGTGTGCTTCACCTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAGAACCCCGGCCAGCTGGCGCGCGTGGCCATCGGCGTCAGCCTCTCCAAGGCCCACCGCGTGGCGTCCTACATCTCCAACCTCACGCGTGACGCCGACTATGGCACGAGCGGCACGCGCGCGGCGATGGCGGTGCACGACTGCTTCTCGAACCTGGGCGACGCCGTGGACGAAATCCGCGGGTCTCTGAAGCAGATGCGGCAGATTGGCGCCGCCGGCGAGGGCTCCGGATCCTTCCTCTTCCAAATGAGCAACGTGCAAACGTGGATGAGCGCCGCACTCACCGACGAGGAGACCTGCACGGACGGATTCCAGGACGTAGCGGAATGTGCCGTGAAAGCGGATGTATGCAATCGCGTCACCAACGTCAAGAAGTTCACCAGCAACGCTTTGGCTCTCGTCAACTCCTACGCCAGTAAGGGTTCGCCCTGA 642 0.6262 MRTQHLRLHHLLLTLFLFAAALSLASSAADEASAPVPDDGDTEFIRSSCNTTLYPDVCFTSLSRYANAVQQNPGQLARVAIGVSLSKAHRVASYISNLTRDADYGTSGTRAAMAVHDCFSNLGDAVDEIRGSLKQMRQIGAAGEGSGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECAVKADVCNRVTNVKKFTSNALALVNSYASKGSP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00181 213 CDD PMEI-like_3 47 209 - -
Viun3g00181 213 FunFam Pectin methylesterase inhibitor 1 40 207 - -
Viun3g00181 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 203 - -
Viun3g00181 213 SMART PMEI_2 40 203 IPR006501 GO:0004857
Viun3g00181 213 NCBIfam pectinesterase inhibitor domain 15 207 IPR006501 GO:0004857
Viun3g00181 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 207 IPR035513 -
Viun3g00181 213 Pfam Plant invertase/pectin methylesterase inhibitor 44 203 IPR006501 GO:0004857
Viun3g00181 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 207 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00181 Viun-Chr3 992573 993829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00181 42 203 Carbohydrate Esterase AT5G53370 27.439 2.30e-13 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00181 3 992573 993829 Viun3g00181 3 992573 993829 ECH