Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02147 ATGCCTCACCCTCCCTCACCCTCTTTCCTCCTCTGTCACGAACAATACTCCTCTTTCCAACAACATTCTCCAACTCTCATCATCACCACCCCATCTTCACCTTCCATTTTTTCCGACCACCACCTCTTCTCCCAACACGACCACCTTCTCTCTCTACTCTCCAAAGAGCCCGCAACGCATGTCACTCCCTCCCCTTCCCACCACGTCGTACGCTGGATTTCTACACTTTCCCACTTCCACGGTTTCGCTCCTCTTACCACCGTTCTCGCCGTTAACTACTTCAACAGGTTCGTTAACAGAAGGAGCTTTCAGACCGAAGATAAACCATGGAAGACTCAACTGGTAGCCGTTGCTTGCGTCTCTCTCGCAGCAAAAGTGGAGGAAACTCGGGTGCCACTTCTTTTGGAGTTGCAAGTGGAGGAATCGGAATTTGTGTTTGAAGCGAAGACCATACATACGATGGAGCTCCTCGTGTTGTCCACTCTCGAATGGAAAATGAACCCTGTCACTCCAATCTGTTTCTTTCAACACTTTCTCACAAGGCTTGCTTTAAAGCGTCACCTGCACTGGGAATTTATGTGTGGGTGCCAACATCTTCTTCTCTCTGTCATTGCCGATTCAAGGGTTATGAGTTATCTTCCTTCTACATTGTCTGCTGCTATAATGATCCACGTTATTGAAGAGATTGAACCATTAAATGCTACGGAGTACCGAAATCAACTTCTAGGTTTACTCAAAAGTAACGAGGAGGACGTGAATGAGTGCTACAAACTGATGCTGGGACTATTAGTTTGCTGTAAAGGGATTCACAATCCTGGTCAGAGGCGCAAACGTGTCTCTGAGCCAAGTAGCCCTGATGGGGTCATTGATGCATCTTTCTGCTGTGAAAGTTCAAATGATTCATGGTCAGTGTCATCACTTTCTGTGGAGCCAGAGTTAAAGAGGAGAAAAGATGAGGTCCCAGTGAATCGAGTGTCTATTGATGTTCTAAATATTCCTCGTTAA 1005 0.4647 MPHPPSPSFLLCHEQYSSFQQHSPTLIITTPSSPSIFSDHHLFSQHDHLLSLLSKEPATHVTPSPSHHVVRWISTLSHFHGFAPLTTVLAVNYFNRFVNRRSFQTEDKPWKTQLVAVACVSLAAKVEETRVPLLLELQVEESEFVFEAKTIHTMELLVLSTLEWKMNPVTPICFFQHFLTRLALKRHLHWEFMCGCQHLLLSVIADSRVMSYLPSTLSAAIMIHVIEEIEPLNATEYRNQLLGLLKSNEEDVNECYKLMLGLLVCCKGIHNPGQRRKRVSEPSSPDGVIDASFCCESSNDSWSVSSLSVEPELKRRKDEVPVNRVSIDVLNIPR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02147 334 Gene3D - 59 167 - -
Viun2g02147 334 CDD CYCLIN_AtCycD-like_rpt1 70 164 - -
Viun2g02147 334 SUPERFAMILY Cyclin-like 151 264 IPR036915 -
Viun2g02147 334 SMART cyclin_7 71 160 IPR013763 -
Viun2g02147 334 Gene3D - 168 257 - -
Viun2g02147 334 SMART Cyclin_C_2 169 297 IPR004367 -
Viun2g02147 334 PANTHER CYCLINS 63 271 IPR039361 -
Viun2g02147 334 CDD CYCLIN_AtCycD-like_rpt2 169 259 - -
Viun2g02147 334 FunFam CYCLIN D32 168 257 - -
Viun2g02147 334 SUPERFAMILY Cyclin-like 48 167 IPR036915 -
Viun2g02147 334 Pfam Cyclin, N-terminal domain 61 167 IPR006671 -
Viun2g02147 334 FunFam D6-type cyclin 47 167 - -
Viun2g02147 334 Pfam Cyclin, C-terminal domain 169 276 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02147 Viun-Chr2 29486686 29488503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02147 47 317 Core Cell Cycle Gene Families AT5G67260 47.931 1.10e-79 247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02147 2 29486686 29488503 Viun3g03874 3 46115251 46117147 ECH
Viun9g03435 9 40592304 40594291 Viun2g02147 2 29486686 29488503 ECH
Viun8g00377 8 2484258 2486119 Viun2g02147 2 29486686 29488503 ECH
Viun2g02147 2 29486686 29488503 Viun2g02147 2 29486686 29488503 ECH
Viun2g02147 2 29486686 29488503 Viun7g03668 7 37599806 37601988 PCT
Viun3g03874 3 46115251 46117147 Viun2g02147 2 29486686 29488503 PCT