Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00844 ATGGCGTCGCAAATGGCGATCCTCTTCCGCACGCGTTCCCTCCTCTTCACGAAACCCTCTTCCCTCATCAAAACCATATCCACATTCCCCTTCCTCTCGCAGGAGCCTCAGCTGGCGGATCCCACCCCTCTCCCTCCCAACCCCGCCTCCGGCAGCCCTCTCTACAACCAAAACTGGCGCACCCCTGGCTCCTCCTCCCATCCCTCCGCCCACGCGCTCGCTCCCGTCGGATTCTACAACCGCGCATCCGCCGATTCCTACGACCCTCAGGCGCTACTCAACCTCTTCGGCGATTGCATGGCCTCGCACGACTGGACGCAAGTCAAGAACACCTTCGAGACCTGGGTCGGCGCCCTCGACAAGACCGGCAAGCCTAACCGTCCCGACGTCAACCTCTTCAACCACTACCTCCGCGCCAATCTCATGCTCGGCTCCTCACCCTCCGACCTCCTCGACCTCGTCGCTCAGATGGACGATTTCAATGTCAAGCCCAATACGGCGTCGTTTAACCTCGTCCTCAAAGCCATGTGCCAGGCCAACGAAACCGTCGCCGCGGAAAAATTGCTCCAACGGATGCTGCAGACAGGAAATGACTCTCTCCCTGATGACGAATCATATGACTTGGTTATTGGAATGCTCTTTTCCACAGACCAGATTGATACTGCATTCAAATATATAGATCAAATTTTGAAATCTGGTAACGTCTTGTCAATGAAGGTATTTATGAGCTGTGTACGGAGATGTCTCAGTAAGGGAAGGTTTGATACTTTGGTGACAATAATTGAAAGGTGCAGGGCATCAGATGTAAACAAAGCTCTCTGCCCCAACTGGGACTTGTGCAATTTTATTGTTGAAACTGCAATTCGAGAGGATAATAGCAAACTAGCTTTCTATGGCCTGGAGTATATGGCCAGATGGATTGTAAAGGGTGAACGTCAAAGAGCCCCTATATTGCTGTCTGTAGATGAAGGTTTAGTTCTGTCAGCAATTTTGACTGCTGGTAGAACCTATGATTCTGAGTTGCTAGGGGCATCATGGGCTGTGTTGGACCGCTCACTGCGTAAAAAGAAAGCCCCTAATCCTGAGTCATACCTTGGGAAGATATATGCCCTTGCATCATTGGGAAATCTACAAAAGGCTTTTAGTACACTGAATGAGTATGAGTTGGCTTATGGAGACACGGGTGAAGAAGCTGAAGAATTGTTCTGCCCATTTACCTCGCTACATCCATTGGTTTTGGCATGCTCTAAGAAGGGTTTTGAGACTCTAGATAATGTTTATTTTCAACTGGAGAATTTAAAGAATGCCGAGCGTCCTTATAAATCTGTTGCTGCAATAAACTGCGTCATTGTAGGATGTGCAAACATATGGGACCTCGATCGAGCTTATCAAACATTTGAGTCAATTGGATCTACTTTTGGGTTGAGCCCTGATATTCATTCGTACAATGGGCTGATGTATGCCTTTGGGAAGCACAAGAAGACACATGAAGCTTCAAAAGTGTTTGAGCACCTGGTGAGTCTGGGTCTCAAGCCTAATGCAAAATCATATTCCCTGATAATTGAGGCCCACCTGATTAACCGGGATGTCAAATCTGCTCTTGCAGTGATTGATGATATGATGAGTGCTGGATTTGAACCGTCAAAATTGATTCTGAAAATGATCAGGCGGCGATGCATGAGAGAAATGGACTACGAAAGTGATGACCGAGTACAATCACTGGCAAATTCTTTGAATTATAGATTGGGTTCAGAAGCCCGGCGGGACATTCTGTTTAATCTTGACTACAGTGGGGGTTATGCTTGA 1806 0.4801 MASQMAILFRTRSLLFTKPSSLIKTISTFPFLSQEPQLADPTPLPPNPASGSPLYNQNWRTPGSSSHPSAHALAPVGFYNRASADSYDPQALLNLFGDCMASHDWTQVKNTFETWVGALDKTGKPNRPDVNLFNHYLRANLMLGSSPSDLLDLVAQMDDFNVKPNTASFNLVLKAMCQANETVAAEKLLQRMLQTGNDSLPDDESYDLVIGMLFSTDQIDTAFKYIDQILKSGNVLSMKVFMSCVRRCLSKGRFDTLVTIIERCRASDVNKALCPNWDLCNFIVETAIREDNSKLAFYGLEYMARWIVKGERQRAPILLSVDEGLVLSAILTAGRTYDSELLGASWAVLDRSLRKKKAPNPESYLGKIYALASLGNLQKAFSTLNEYELAYGDTGEEAEELFCPFTSLHPLVLACSKKGFETLDNVYFQLENLKNAERPYKSVAAINCVIVGCANIWDLDRAYQTFESIGSTFGLSPDIHSYNGLMYAFGKHKKTHEASKVFEHLVSLGLKPNAKSYSLIIEAHLINRDVKSALAVIDDMMSAGFEPSKLILKMIRRRCMREMDYESDDRVQSLANSLNYRLGSEARRDILFNLDYSGGYA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00844 601 MobiDBLite consensus disorder prediction 51 67 - -
Viun2g00844 601 Gene3D Tetratricopeptide repeat domain 324 581 IPR011990 GO:0005515
Viun2g00844 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 513 547 IPR002885 -
Viun2g00844 601 MobiDBLite consensus disorder prediction 37 67 - -
Viun2g00844 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 165 199 IPR002885 -
Viun2g00844 601 Pfam PPR repeat 168 194 IPR002885 -
Viun2g00844 601 Gene3D Tetratricopeptide repeat domain 94 303 IPR011990 GO:0005515
Viun2g00844 601 PANTHER OS07G0599000 PROTEIN 1 600 IPR044605 -
Viun2g00844 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 478 512 IPR002885 -
Viun2g00844 601 NCBIfam pentatricopeptide repeat 480 514 IPR002885 -
Viun2g00844 601 NCBIfam pentatricopeptide repeat 516 548 IPR002885 -
Viun2g00844 601 NCBIfam pentatricopeptide repeat 168 196 IPR002885 -
Viun2g00844 601 Pfam PPR repeat family 477 523 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00844 2 19075499 19082099 Viun2g00844 2 19075499 19082099 ECH