Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00826 ATGATGGAGGATTATAAGAACCGGCACCTTCAACAGCACCAGCATCAACAAACCCATCTTCAGCAACAGCAAAATCGGAACGAGGACTCTGAGAGGATGGAGAGGTACCCGAGGGATTTGCTTCAGGGATTTGTCAGGAGGGGTATTACCATTAGGGATGATAGTATGAATAACGTTAGCGGTAGCGTATCGCAGCCTCTTCATCATCCTGGTCATGAGCAACAAGACCAGGAGGAGGATGAAGAGCTTGAGTTGAACCTTGGTCTCTCTCTCGGAGGAAGATTTGGGGTGGACAAGAACGCAAAAAAGAAGAAGCTTATGCGTTCGTCTTCTGTGGTGGGGACAATGCCTCTGTTCAGGGAGGACGATGCGGTGGCGCCGCCGCTTGCAGCTTTCCCTGCGCTGATGAGAACGTCTTCCCTGCCAACCGAGACGGAGGAGGAGTGGCGGCGGAGGAAGGAGATGCAGACTCTGCGCCGGATGGAGGCCAAGAGACGCCGGTCTGAGAAGCAGAAGGGATCCCGGGAGGCCGTTGCTGAGGTGGAGGGTGGTAGTGTGGTGGCAATGGGGTTGACCAGATTTGGTTCTGCCACGTTGGCTCCGCCTCCTCTGGGGTGGAGTGTGGCGGCACCAAAGCAGGTTGTTCTCGGTGATGTGTTAGGGAAGGGAAAGGGTTTTCAAGGTCTGTTTGGGCAGCCATCTTCTCAGGGTTCGGCAGATTCGCAAGGTGGAAGCTCTTCATCAGTGTCCGAAATGGATAGCAAGACTTTTTTAGGAACAAGTAGTGGTGGTGGTGAAGCAAGCCCTGGTAGCAATCAATCAGCACAAGATGGTGTGGGTTTAGGGGCTAAGAGAAATGAGAATGTGGGTAGAAGTTGGAAAGCAGAGATCGAGAATCCATGTAACAAATCTCATCATTCCCAGAACATGAACATAATGGGAAAGCAAATTGGGAGAAACTCAATGGAAGACATGCCTTGTGTGTTCACAAAAGGGGATGGTCCTAATGGAAGAAGGATTGAGGGAATATTGTACAAATATGGTAAGGGAGAGGAAGTGAGGATCATGTGTGTGTGCCATGGAAACTTTCTGTCTCCAGCAGAGTTTGTTAAACATGCTGGTGGTGGAGATGTTGCACACCCTCTTAGGCACATTGTTGTCAACCCTTCTGCTGCACCCTTTTAG 1185 0.508 MMEDYKNRHLQQHQHQQTHLQQQQNRNEDSERMERYPRDLLQGFVRRGITIRDDSMNNVSGSVSQPLHHPGHEQQDQEEDEELELNLGLSLGGRFGVDKNAKKKKLMRSSSVVGTMPLFREDDAVAPPLAAFPALMRTSSLPTETEEEWRRRKEMQTLRRMEAKRRRSEKQKGSREAVAEVEGGSVVAMGLTRFGSATLAPPPLGWSVAAPKQVVLGDVLGKGKGFQGLFGQPSSQGSADSQGGSSSSVSEMDSKTFLGTSSGGGEASPGSNQSAQDGVGLGAKRNENVGRSWKAEIENPCNKSHHSQNMNIMGKQIGRNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSAAPF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00826 394 MobiDBLite consensus disorder prediction 229 279 - -
Viun2g00826 394 MobiDBLite consensus disorder prediction 158 177 - -
Viun2g00826 394 Coils Coil 151 171 - -
Viun2g00826 394 MobiDBLite consensus disorder prediction 1 33 - -
Viun2g00826 394 Pfam Putative nuclear localisation signal 135 254 IPR032310 -
Viun2g00826 394 Pfam Tify domain binding domain 353 387 IPR032308 -
Viun2g00826 394 PANTHER AFP HOMOLOG 2 36 391 IPR031307 GO:0007165
Viun2g00826 394 Pfam Ethylene-responsive binding factor-associated repression 78 114 IPR012463 -
Viun2g00826 394 MobiDBLite consensus disorder prediction 52 82 - -
Viun2g00826 394 MobiDBLite consensus disorder prediction 158 181 - -
Viun2g00826 394 MobiDBLite consensus disorder prediction 53 70 - -
Viun2g00826 394 MobiDBLite consensus disorder prediction 227 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00826 Viun-Chr2 18935982 18939096 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00826 2 18935982 18939096 Viun2g00826 2 18935982 18939096 ECH