Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00721 ATGAAGATTAGTTGTAATGGGTGTCGCATTCTTCGCAAAGGTTGTACTGAGGACTGTGTCATTAGGCCATGTCTTGAATGGATAAACTCTTCTGAGGCACAAGCTAATGCCACCCTTTTCCTTTCTAAGTTCTATGGTCGTGCCGGCTTGCTCAATCTCATCAATGCTGTCCCACAACAACATCGAACTGATGTTTTCAAGTCACTAATGTACGAGGCCTGTGGGAGAATCATAAACCCAACATTTGGATCAGTTGGGTTATTTTGGAGTGGTGAATGGGCCCAATGCCAAGCTGCTGTTGACGCGGTGCTAGCTGGGTCCCAGATCAATGTCATGCCAAGCGACCGTGGTTCCAAACTCCTTGACATACGTCATGTGTCCAAAGATGCGAACATGGACAAGGTGAAAGGAAAATCTAAGAAGCACAAAACGACCGAGGATGTTACCATGCCAATGTCACATGTGGGTTTGGTCAACCCAGCTACATTATGGAAACCAATTTTAAGCCATGAGCCAAGACGGTTCGAGGGTGGTAACGGGGAAATAGTGAAGGCTGACAAGCCAAGAATAAATGGTGGAGCCAATAATATTGATTTGGAGCTCACTCTTGGCTAG 615 0.4602 MKISCNGCRILRKGCTEDCVIRPCLEWINSSEAQANATLFLSKFYGRAGLLNLINAVPQQHRTDVFKSLMYEACGRIINPTFGSVGLFWSGEWAQCQAAVDAVLAGSQINVMPSDRGSKLLDIRHVSKDANMDKVKGKSKKHKTTEDVTMPMSHVGLVNPATLWKPILSHEPRRFEGGNGEIVKADKPRINGGANNIDLELTLG 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00721 204 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Viun2g00721 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 142 - -
Viun2g00721 204 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00721 Viun-Chr2 17089445 17090734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00721 1 203 AS2 family AT3G02550 45.175 2.56e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun2g00721 LOB 7e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00721 2 17089445 17090734 Viun2g00721 2 17089445 17090734 ECH