Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00613 ATGAAAAATATGCAAGGCTTCAAGACAGCACCACCAAGTTCACAACTCTACTGCCACTCTTCCTTTTTGCTTCGGGGAAACGACGGCAACCGAAACCCCACCACCGGGTTCTGTGATCTTGGGGACCTTCACCATTCCTCTGCCGTTTTTCATCAAGATGGTGTTGATTTAGGCTCAAGTTCTATGTTTAGTGTGAAGTCAAGCAATGTTGTTGGTGGAAGTAACATGCAATATGGAACATTGAGCACGAATGTTGGGTCTTCGGAGATTGGTTCAGGTGGGGGAGGGTGCATGGATACAGGGCTGCAACTGATGTACCACAAAGGAGTGGCTATGCAAACTTTGCCTTTGGGGAATGGTCATGTTGACAATTGGGCTGATTCGGGCATAGCAGATAATAGCCAACAAACTGATGATACTTCCACAGATATTGATACTGATGATAGAATCCAATGCAATAGAGGTAAGAATGGCTCACGTATGGTTATGCAGTCCAAGGATCAGACAAAGATCAAACCTGAAGATCAGAAGACCCTTCGTAGACTAGCTCAGAATCGAGAGGCTGCAAAGAAGAGTCGGTTAAGGAAAAAGGCATATGTACAGCAATTGGAGAACAGCCGAGTCAAGCTTGTTCAATTAGAGCAAGAACTTCAACGAGCACGTCAGCAGGGTATATTTATTGCCACTGAAGGGAATCAGGGTCATTTGGCTGTTGGAAATGGTGCCTTAGCATTTGACTTGGAATATGCTCACTGGGTTGAAGAACACCAACGTTTGCTCAATGATCTAAGATTGGCTGTGAATTCTCAAATGAGTGATGATGAGTTACACATCCTTGTTGAAGGTGTGAGGGCACATTATAATGAGTTATTTAGGTTAAAGAGAATAGGAGCAAAGGCTGATATATTTCACATACTTAGTGGAATGTGGAAAACTCCAGTGGAAACACGTTTTATGTGGCTTGGTGGATTCCGTTCATCTGAACTGCTAAAGATCATCAAGAACCACCTTGAGCCTTTGACAGAGCAGCAATTGTTGGGAATTTGTAATTTGCAACAATCTTCTCTTCAGTCTGAGGATGCTTTAGATAAAGGCATGGAAGCATTGCATCAATATCTTGTGGAAACACTTTCCTCCACCTCCCTTGGACCCAATGGTAATGGAAATGTTGCTGATTATATGGACCAAATGGCTCTTGCAATGGCCAAGCTTGGTGAACTAGAAGGTCTCCTTCAGCAGGCTGATCTCTTGAAGCAACATTATCTTCAACAATTGCAACGAATTTTGACGGTACGCCAAACTGCAAGAGCACTCCTTGTCCAAAATGATTTCATTTCAAGACTAAGAGCACTTAGTTCATTATGGTTGGCACGCCCTAAAGAATAA 1386 0.4315 MKNMQGFKTAPPSSQLYCHSSFLLRGNDGNRNPTTGFCDLGDLHHSSAVFHQDGVDLGSSSMFSVKSSNVVGGSNMQYGTLSTNVGSSEIGSGGGGCMDTGLQLMYHKGVAMQTLPLGNGHVDNWADSGIADNSQQTDDTSTDIDTDDRIQCNRGKNGSRMVMQSKDQTKIKPEDQKTLRRLAQNREAAKKSRLRKKAYVQQLENSRVKLVQLEQELQRARQQGIFIATEGNQGHLAVGNGALAFDLEYAHWVEEHQRLLNDLRLAVNSQMSDDELHILVEGVRAHYNELFRLKRIGAKADIFHILSGMWKTPVETRFMWLGGFRSSELLKIIKNHLEPLTEQQLLGICNLQQSSLQSEDALDKGMEALHQYLVETLSSTSLGPNGNGNVADYMDQMALAMAKLGELEGLLQQADLLKQHYLQQLQRILTVRQTARALLVQNDFISRLRALSSLWLARPKE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00613 461 Pfam bZIP transcription factor 176 216 IPR004827 GO:0003700|GO:0006355
Viun2g00613 461 MobiDBLite consensus disorder prediction 126 147 - -
Viun2g00613 461 PANTHER TRANSCRIPTION FACTOR TGA9 122 460 - -
Viun2g00613 461 FunFam BZIP family transcription factor 176 225 - -
Viun2g00613 461 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Viun2g00613 461 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 219 IPR004827 GO:0003700|GO:0006355
Viun2g00613 461 ProSiteProfiles DOG1 domain profile. 242 458 IPR025422 GO:0006351|GO:0043565
Viun2g00613 461 SMART brlzneu 173 242 IPR004827 GO:0003700|GO:0006355
Viun2g00613 461 CDD bZIP_HBP1b-like 177 229 - -
Viun2g00613 461 Gene3D - 176 225 - -
Viun2g00613 461 Coils Coil 196 223 - -
Viun2g00613 461 Pfam Seed dormancy control 260 334 IPR025422 GO:0006351|GO:0043565
Viun2g00613 461 SUPERFAMILY Leucine zipper domain 177 220 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00613 Viun-Chr2 14925435 14929928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00613 7 461 bZIP Transcription Factor Family AT1G68640 53.911 2.77e-155 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g00613 DOG1 8e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00613 2 14925435 14929928 Viun2g00613 2 14925435 14929928 ECH