Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00465 ATGAAAGTATATCCTCGACACCCCAAAACGCGTAGCATCGATCGTCTTCTGATTTCATTTCTCTTTCATTTCCATTCTTCTGCAACCTCACCATTATATCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCAACAATGTCTTCTTCAGTCTACTCTTTCCTCTGCTTGGTCTTTTTCTTCACCATTCTCACCCTTACGCATTCGTCAACCGAGTACCTCAAGCTACCGTTACTCCCTCGAACAACACTCTCCAACGTCTCCAACATCCTGGCCGCTGACCTCCACCGCCTCTCGGGCCGCCGTACTTTGCCTCAGTCCCCGCTAACCTCCGGCGCCGCCATGGGCTCCGGGCAGTACTTTGCGGACCTCCGCATCGGATCCCCGCCGCAGCGCCTCCTCCTGGTAGCCGACACCGGCAGCGACCTTGTCTGGGTGAAATGCTCCGCCTGCCGTAACTGCTCCACCAAGCGACCCGGATCCGCATTCTTGCCACGACATTCAAGAAGCTTCTCCTCCTTCCACTGCTACGATTCGCCGTGTCGATTCGTCCCTCACCCCACTCCCACACACTGTAACAACCACACCAAACTCCACACGCCCTGCCGCTACGAATATTCCTACGCGGATGGGTCCACAACAACGGGCTTCTTCTCCAAGGAAACGACGACGTTTAACACCAGCTCCAACAAACAAGGGAAAATTAAAAACCTGGCATTCGGATGCGGGTTTAAAACCTCAGGCCCCAGTGTAACAGGCTCCAGCTTCAACGGCGCGCAGGGCGTAATGGGACTGGGCCGCGGGCCCATTTCGTTTACTTCCCAACTCGGCCGCAAATTCGGGAACACCTTCTCTTACTGTCTACTCGACTACACCCTATCCCCGCCCCCCAAAAGCTACCTTACAATCGGCGCCTCCTCAAACGACGCCGTTTCTCGGAAGCTGTTCAGTTACACGCCTTTTGTCACAAACCCTCTGTCTCCCTCGTTCTATTACATCATCATCCAGAGTGTCTCTGTTGACGGCGTCAGGTTACCGATTAGCCCTTCCGTTTGGGGGATCGATGACAATGGAAACGGCGGCACCGTCCTGGACTCCGGCACGACGCTTTCTTTTCTAGCGGAGCCAGCTTATAAGCAGGTGTTGGCCGCGTTCCGGCGGCGCGTGAGGCTTCCTGCGGCGGAGGGAGCCGCCGCGCTCGGGTTCGACCTTTGTGTTAACGTCTCCGGCACTGCAAGGCCGAGGCTGCCGAAGCTGAGATTCGTCCTCGCCGGAAAAGCTGTGCTGTCACCGCCGGCAGGGAATTATTTTATTGAGCCGGTGGATGGAGTCAAGTGTCTCGCGGTTCAGCCTGTTCGACCGGGTTCTGGATTTTCTGTGGTTGGGAATTTGATGCAGCAAGGGTTCTTGTTTGAGTTCGATTTGGACCGGTCGCGGATCGGGTTCTCTCGTCACGGATGTGCGGTTCGCTAA 1482 0.5567 MKVYPRHPKTRSIDRLLISFLFHFHSSATSPLYLSSLSLSLSLSLSRSTMSSSVYSFLCLVFFFTILTLTHSSTEYLKLPLLPRTTLSNVSNILAADLHRLSGRRTLPQSPLTSGAAMGSGQYFADLRIGSPPQRLLLVADTGSDLVWVKCSACRNCSTKRPGSAFLPRHSRSFSSFHCYDSPCRFVPHPTPTHCNNHTKLHTPCRYEYSYADGSTTTGFFSKETTTFNTSSNKQGKIKNLAFGCGFKTSGPSVTGSSFNGAQGVMGLGRGPISFTSQLGRKFGNTFSYCLLDYTLSPPPKSYLTIGASSNDAVSRKLFSYTPFVTNPLSPSFYYIIIQSVSVDGVRLPISPSVWGIDDNGNGGTVLDSGTTLSFLAEPAYKQVLAAFRRRVRLPAAEGAAALGFDLCVNVSGTARPRLPKLRFVLAGKAVLSPPAGNYFIEPVDGVKCLAVQPVRPGSGFSVVGNLMQQGFLFEFDLDRSRIGFSRHGCAVR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00465 493 Gene3D Acid Proteases 308 492 IPR021109 -
Viun2g00465 493 PANTHER OS07G0603500 PROTEIN-RELATED 104 490 - -
Viun2g00465 493 ProSiteProfiles Peptidase family A1 domain profile. 123 486 IPR033121 -
Viun2g00465 493 Pfam Xylanase inhibitor N-terminal 123 307 IPR032861 -
Viun2g00465 493 CDD pepsin_A_like_plant 122 490 IPR034161 -
Viun2g00465 493 FunFam Aspartyl protease family protein 315 492 - -
Viun2g00465 493 Gene3D Acid Proteases 103 307 IPR021109 -
Viun2g00465 493 Pfam Xylanase inhibitor C-terminal 334 486 IPR032799 -
Viun2g00465 493 SUPERFAMILY Acid proteases 117 490 IPR021109 -
Viun2g00465 493 PRINTS Pepsin (A1) aspartic protease family signature 129 149 IPR001461 GO:0004190|GO:0006508
Viun2g00465 493 PRINTS Pepsin (A1) aspartic protease family signature 365 376 IPR001461 GO:0004190|GO:0006508
Viun2g00465 493 FunFam Aspartyl protease family protein 2 105 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00465 Viun-Chr2 9701535 9703230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00465 99 490 Miscellaneous Gene Families AT1G77480 25.547 1.39e-22 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00465 2 9701535 9703230 Viun2g00465 2 9701535 9703230 ECH