Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00438 ATGACGGACATCACCGACGACATAGTGGAGGAAATCTCCTTCCAAGGCTTCGACGATGACTGCAATATGCTCGGAAGCCTTCTCAACGACATTTTGCAAAGAGAGGCTGGCCCAACCTTCGTTGACAAGCTTGAAAAAATTCGAGTCCTTGCTCAGAGTGCTTGTAATTTGAGACATGCGGGGATTGAAGACATGGCTGAGCTGCTAGAGAAGCAATTGTCTTCAGAGTTATCCAAGATGACACTAGAAGAGGCTCTCACACTTGCTCGTGCCTTTAGCCATCATCTTACTTTGATGGGTATTGCTGAAACTCACCATAGGGTTCGCAAAGGAGGAAACATGGCTCTTGTTGCAAAATCTTGTGATGACATCTTTAACCACCTGTTGCAAGAGGGAGTTACTCCAGAGGAGCTTTATAACTCGGTTTGCAAGCAGGGGGTCGAAATTGTTCTCACAGCTCACCCCACTCAAATTAATCGTCGTACCTTGCAATACAAACACATTAAAATTGCTCATCTTTTGGATTATAATGATCGAACTGATCTTGGCCCTGAAGACCGAGATATGTTGATTGAGGATCTGGTGAGAGAGATAACTTCAATATGGCTGACAGATGAACTTAGGCGTGAGAAACCCACACCAGTCGATGAAGCCAGGGCCGGGTTGAATATTGTGGAGCAATCACTCTGGAAAGCTGTTCCTCATTATTTACGTCGAGTTAGCAGCGCTTTAAAGAAGCACACAGGAAAACCACTTCCATTGACTTGCACTCCAATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCTAAGGTCTCAAAAGATGTTTCCCTTCTGTCTAGATGGATGGCAATTGACCTTTACGTTCGGGAAGTGGATACCCTGAAATTTGAGCTATCCATGAAACGGTGCAGCGATAAGTTGTCGAAATTGGCACATGAAATTCTAGAAGAAGCTAACAATGAGGAGAATCACCGTGAGCATTGGAAAGAATCTAGGAGTATAAGTCAATTCAAATATTCTAATCAACAAGCTTCACCTCTTCCAACTAAACTTCCACCTGGAGCTCATTTACCTTCTTGTACTGAAAAAGGTGGATCTGAGCATCCCAGACTCATTCCAGGTGCTGATCACAAGCAATTCATTCCCAAGGGTGGCGAGATTTCAAGTTCAACTGAGAGCAGCAGTATCAATACCCGTTCACCATCACTAATGTCACCAAGTGCCAGTACTTCTTCATTAGTTTCAATGTCACGCTCTCCTTCTTTCAACTCTAGTCAACAACTTCTTGCTCAGAGGAAATTGTTTGCAGAATCCCAGATAGGAAGGACCAGTTTCCATAGGCTTTTGGAGCCAAAGCTCCCTCAGCATCCTGCAATTGCTCCTTATAGAGTTGTCCTTGGAAATGTAAAAGATAAGCTTTTGAGAACTCGTAGACGGTTGGAGCTTCTTCTCGAGAATGGTCCATGTGAACAAAATCCTATGAATTATTATGAAACAACAGATCAGCTCTTGGAACCTTTGCTCCTTTGCTATGAATCTTTGCAATCATGTGGATCTGGGGTGCTAGCCGATGGTCGACTTACTGATCTGATTCGAAGAGTCACTACTTTTGGCATGGTGTTAATGAAGCTTGACTTGCGCCAGGAATCTGGCAGGCATGCTGAAACGCTTGATGCAGTTACAAGTTATTTGGACTTGGGTACATACAGTGAGTGGGATGAAGAAAAGAAACTGAACTTCTTAACTAAAGAGCTGAAAGGGAAAAGACCACTGGTTCCCCCTAGTATAGAGGTTGCTCCAGATGTTAGAGAAGTCTTGGACACGTTCCGAACTGCTGCTGAGTTAGGAAGCGATTCATTTGGTGCCTATGTGATCTCTATGGCCTCAAATGCCAGTGATGTTCTTGCAGTAGAGCTTTTGCAGAAGGATGCACGACTTGCTGTCAGTGGAGAGTTAGGAAGAGCTTGTCCAGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTAAAGGACCTGAGAGGAGCTGGTTCAGTTATCAGAAAGCTCCTGTCAATAGATTGGTACCGACAACACATCATTAAAAACCATAATGGGCATCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCCGGGCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAAGAAGATGTTGTGGCTGCATGCAAGGAGTATGGTATAAAGGTTACTCTCTTTCATGGCCGTGGGGGGAGTATTGGCCGCGGTGGTGGCCCAACATATATGGCCATTCAGTCTCAACCACCCGGCTCTGTGATGGGAACCCTTCGCACAACAGAGCAAGGAGAGATGGTGCAGGCCAAGTTTGGCTTGCCACAAACAGCTATTAGGCAACTTGAGATCTACACAACAGCTGTGTTACTTGCCACCCTGCGTCCTCCTCTCCCGCCACGTGAAGAAAAGTGGCGCAATCTGATGGAAGAGATTTCAAAGCTGAGTTGCCAATGTTACCGCAGTGTAGTGTATGAAAATCCAGAATTTCTGTCATACTTCCATGAAGCCACACCTCAATCAGAGCTTGGGTTCCTCAACATCGGTAGCCGCCCCGCAAGGCGAAAGAGCACTATCGGAATTGGACACCTCCGTGCCATTCCCTGGGTGTTTGCATGGACTCAAACGAGGTTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGGTTGAAAGGTCCTTGTGATAAAGGACAAACTGAAGAGCTAAAGGCCATGTACAAAGAGTGGCCTTTCTTTCAAAGCACCATAGACTTGATTGAGATGGTTCTGGGAAAAGCAGACATTCCTATTGCCAAGCACTATGATGAAGTTCTTGTCTCAGAGAAGAGACAAGAAATTGGAGGTCAACTGAGGGATGAGCTCGTCCAAACTCGCAAGTTTGTGTTAGCTGTTAGTGGGCATGACAAACCTCAGCAGAATAATAGGAGCTTGAGGAAACTGATTGAGAGTAGGCTTCCCTTCCTCAATCCCTTGAACATGTTGCAGGTAGAGATTCTCAAGAGGCTAAGGAGTGATGATGACAACCTTAAAGCCAGAGATGCCTTGCTCATCACCATAAATGGCATTGCTGCTGGTATGAGGAACACTGGTTAA 3162 0.4545 MTDITDDIVEEISFQGFDDDCNMLGSLLNDILQREAGPTFVDKLEKIRVLAQSACNLRHAGIEDMAELLEKQLSSELSKMTLEEALTLARAFSHHLTLMGIAETHHRVRKGGNMALVAKSCDDIFNHLLQEGVTPEELYNSVCKQGVEIVLTAHPTQINRRTLQYKHIKIAHLLDYNDRTDLGPEDRDMLIEDLVREITSIWLTDELRREKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSSALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVSKDVSLLSRWMAIDLYVREVDTLKFELSMKRCSDKLSKLAHEILEEANNEENHREHWKESRSISQFKYSNQQASPLPTKLPPGAHLPSCTEKGGSEHPRLIPGADHKQFIPKGGEISSSTESSSINTRSPSLMSPSASTSSLVSMSRSPSFNSSQQLLAQRKLFAESQIGRTSFHRLLEPKLPQHPAIAPYRVVLGNVKDKLLRTRRRLELLLENGPCEQNPMNYYETTDQLLEPLLLCYESLQSCGSGVLADGRLTDLIRRVTTFGMVLMKLDLRQESGRHAETLDAVTSYLDLGTYSEWDEEKKLNFLTKELKGKRPLVPPSIEVAPDVREVLDTFRTAAELGSDSFGAYVISMASNASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACKEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRTTEQGEMVQAKFGLPQTAIRQLEIYTTAVLLATLRPPLPPREEKWRNLMEEISKLSCQCYRSVVYENPEFLSYFHEATPQSELGFLNIGSRPARRKSTIGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGPCDKGQTEELKAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSEKRQEIGGQLRDELVQTRKFVLAVSGHDKPQQNNRSLRKLIESRLPFLNPLNMLQVEILKRLRSDDDNLKARDALLITINGIAAGMRNTG 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00438 1053 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 711 723 IPR033129 -
Viun2g00438 1053 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 18 1053 IPR015813 GO:0003824
Viun2g00438 1053 MobiDBLite consensus disorder prediction 380 425 - -
Viun2g00438 1053 Gene3D Phosphoenolpyruvate/pyruvate domain 289 350 - -
Viun2g00438 1053 Gene3D Phosphoenolpyruvate/pyruvate domain 408 547 - -
Viun2g00438 1053 MobiDBLite consensus disorder prediction 392 425 - -
Viun2g00438 1053 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Viun2g00438 1053 FunFam Phosphoenolpyruvate carboxylase 1 420 548 - -
Viun2g00438 1053 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1053 IPR022805 GO:0006099|GO:0008964|GO:0015977
Viun2g00438 1053 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1053 IPR021135 GO:0006099|GO:0008964|GO:0015977
Viun2g00438 1053 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Viun2g00438 1053 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Viun2g00438 1053 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Viun2g00438 1053 Pfam Phosphoenolpyruvate carboxylase 457 1053 IPR021135 GO:0006099|GO:0008964|GO:0015977
Viun2g00438 1053 Pfam Phosphoenolpyruvate carboxylase 19 341 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00438 Viun-Chr2 9022208 9036892 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00438 2 9022208 9036892 Viun2g00438 2 9022208 9036892 ECH