Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00393 ATGGCCACTCTTCAGAGTTGGAGAAAAGCCTACGGCGCTCTCAAAGACACCACTAAAGTTGGTCTCGCTCATGTCAATAGTGATTATGCGGAGTTGGAAGTTGCCGTAGTCAAAGCAACCAACCACGTCGAGTGTCCTCCCAAAGAGAGACACCTTCGCAAAATTTTGCTCGCAACTTCTGCTGTACGGCCTAGAGCTGATGTTGCGTGCTGCATTCATGCGCTTTCGCGACGGTTGGCGAAGACGCGAAACTGGACGGTGGCACTGAAAACATTAATCGTGATTCATAGGTTATTGAGAGAGGGTGATCCTACTCTTAGAGAAGAATTTCTTAATTTCTCAGAGAGGGGGCGCATACTCCAACTTTCTAACTTCAGAGATGATTCTAGTCCAATAGCTTGGGATTGTTCTGCCTGGGTTCGTACTTATGCATTATACTTGGAAGAAAGACTTGAATGTTTCTCGATTCTGAAGTATGATATTGAAGCTGAGCGTCTACCTAAGCCTGTTGCTGGTCAAGACAAGGGGTATAGCAGGACAAGGGATTTGAATAGTGAGGAGCTATTGGAGCAATTGCCTGCTTTGCAGCAGCTTCTCTATTGCCTTGTTGGTTGCCGTCCAGAAGGAGCAGCTGCTAGGAGCTATGTGATACAATATGCCCTGGCCCTGGTTCTAAAAGAGAGCTTTAAAATTTACTGTGCTATTAATGACGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGCCAAGGCATGAAGCTACCAAAGCCTTTGATGTCTATAAACGTGCTGGACAGCAGGCAGAAAGTCTCTCTGATTTCTATGAAATTTGCAAAAGATTGGAAATTGCTAGGAATTTTCAGTTTCCTGTTTTAAGAGAGCCTCCGGTATCATTTCTTGTTACCATGGAAGACTACATAAAGGATGCACCTCGACTGGTTGCAGTTTCAAGTGAGCCATTATTACTGACTTACAGACCAGATGATGTTCCCACAATAGAATACGATAAATTATCTCAAGAACAGGAGCCCTCAGTGCCTGTTGATGATGTTGTCTCAAATTCTGAGCTTGCTCCTCCTCCAGCGTCCCACAACTATTTTGAAACTGGAGACTTGCTGGGGTTGAATGACAGTACATCTGAAGCATCCTTGATGGAAGAAAGAAAAGTTCATGCCCTAGCCATAGTTCCTACCGAAATTGATTCACAAGCTGATCCGGCCAGAGATTTTGATCCAACCGGATGGGAGCTTGCTCTGGTTACCCCTCCAAATACAACTATTTCTTCAGTCAACGAGACACAATTGGCTGGTAGGTTGAATTCTCTCACCCTCAACAGTTCATATGATCAAGGAGCATATATATATCCACAACAACCTGTTTTTGGAGTGCCAGCTCCTAATCCATTTGAAGTTCAAGATCCTTTTGTTTTGTCAACTAGCATCCCTATTGCAACAATTTCTCAACAGCATGTAAATCCTTTCGGTCATTACCAACCATATCACCCTCACCAGCAGCATATGCTGATGAGCTCAGCAAATCCTTTCGAGGATGCAGGATATGGGGCATTTCCTTTGCATCCTGTTTCTCACGCTCATAGTAACAATCCATTTGGAAGCACTGGCATGATATAG 1632 0.4387 MATLQSWRKAYGALKDTTKVGLAHVNSDYAELEVAVVKATNHVECPPKERHLRKILLATSAVRPRADVACCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTLREEFLNFSERGRILQLSNFRDDSSPIAWDCSAWVRTYALYLEERLECFSILKYDIEAERLPKPVAGQDKGYSRTRDLNSEELLEQLPALQQLLYCLVGCRPEGAAARSYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEATKAFDVYKRAGQQAESLSDFYEICKRLEIARNFQFPVLREPPVSFLVTMEDYIKDAPRLVAVSSEPLLLTYRPDDVPTIEYDKLSQEQEPSVPVDDVVSNSELAPPPASHNYFETGDLLGLNDSTSEASLMEERKVHALAIVPTEIDSQADPARDFDPTGWELALVTPPNTTISSVNETQLAGRLNSLTLNSSYDQGAYIYPQQPVFGVPAPNPFEVQDPFVLSTSIPIATISQQHVNPFGHYQPYHPHQQHMLMSSANPFEDAGYGAFPLHPVSHAHSNNPFGSTGMI 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00393 543 FunFam Clathrin assembly protein AP180 6 161 - -
Viun2g00393 543 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Viun2g00393 543 SMART enth_2 30 161 IPR013809 -
Viun2g00393 543 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Viun2g00393 543 Gene3D - 7 161 IPR008942 -
Viun2g00393 543 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 479 IPR045192 GO:0048268|GO:0072583
Viun2g00393 543 SUPERFAMILY GAT-like domain 178 309 - -
Viun2g00393 543 CDD ANTH_N 32 154 - -
Viun2g00393 543 FunFam Putative clathrin assembly protein 173 321 - -
Viun2g00393 543 Gene3D ANTH domain 173 319 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Viun2g00393 543 SUPERFAMILY ENTH/VHS domain 32 162 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00393 Viun-Chr2 7746271 7760321 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00393 2 7746271 7760321 Viun2g00393 2 7746271 7760321 ECH