Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03313 ATGGTGTTGATCAACGAAGAAATTGCGCCCTACATGGTGCAAGAGGAAATCACCGAAGAAGAGAACGAGGAAGAGAGCATCGACTATGACCAGCTGAAGAAACGCATGTGGAAGGATAGGATTCTGCTACAGAAGCTGAAGGAGAAGCGTGAGAAACAAGAGCCAGACAAGGAAGCAAAATTGGAGGCGTCGAGAAGGAAGAAGATGTCAAGAGCACAAGACTCGGTCCTCAAGTACATGGTGAAGATCATGGAAGTCTGCAACGCCCAAGGTTTTGTTTATGGCATCGTCCCAGAAAAGGGAAAGCCCGTGTCTGGTTCCTCCGACAGCTTGCGCGAGTGGTGGAAGGACCAAATCCGCTTTGACCATAGCGCCCCCACTGCAATATCAAATTACCTGCCACTCTTTGAAAAAGATGAGATGGATATAACTTCTTATATTCACCTCCTCCAAGACCTGCAAGACTCTACCTTAGGTTCTCTCTTATCTGCTCTCCTGCAACACTGTGTCCCTCCACAGAGAAAGTTCCCTCTGGAGAGAGGCTTATCTCCCCCTTGGTGGCCCACTGGGGAGGAGGTTTGGTGGGGTGAGCAGGGCCTTCTGGCCCAAGAACATGGCCCACCACCTTATAGAAAGCCCCATGACCTGAAAAAGGCCTGGAAAGTTTCTGTTCTGGCTGCAATTATCAAACACATATCACCTGATTTTGATAAACTGAGAAGGTTGGTGACTCAGTCGAAGACCTTGCAAGATAAGATGACAGCGAAGGATAGTGCAACTTGGTCCAAAGTCATGAACCAAGAAGAGGTTTTACTAGGAATGACTGATAAGTGCCTCAAAATATCTCTCTCAGAGGAAGATGTTGAGAACCATGAAGAGGGAGGAGAAGCTTCTTGCTCTGCTCAACTTTTGAAGAGGAAGTACTCTTTTGGGAGTGCAAGCGAGGATGATAAGCTATATCCATGTCAAAACGTTGAGTGTCCGCAGAGCGAGTTGTCTATGGGGTTTTTGGATAAGAACATGAGGTTGGACCATGAAGCTCTGTGTGCCTACCGCACAGAGGATAGCCAAGTTCCTTTTCATCGTTATCTCTCCAATGAAGCATCACCAATCACGAGTTTAGATGATTGGATGAATTTGGCTATTCAGAATGATGCGAAGGTGCTGGAGGCTGCTGGTGGGAGTGGAACATTGGAAGATGACGTTTGTTACTGGCTTAATGGTGTTGAAAATCTTGAACTGCAAGCTGCACTGGAGATATTAGTGAAAGATAACCAGGACTTTGATCAAGAGGATGCAACCTCAATTTGGGACCTGCCATAG 1323 0.4686 MVLINEEIAPYMVQEEITEEENEEESIDYDQLKKRMWKDRILLQKLKEKREKQEPDKEAKLEASRRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIVPEKGKPVSGSSDSLREWWKDQIRFDHSAPTAISNYLPLFEKDEMDITSYIHLLQDLQDSTLGSLLSALLQHCVPPQRKFPLERGLSPPWWPTGEEVWWGEQGLLAQEHGPPPYRKPHDLKKAWKVSVLAAIIKHISPDFDKLRRLVTQSKTLQDKMTAKDSATWSKVMNQEEVLLGMTDKCLKISLSEEDVENHEEGGEASCSAQLLKRKYSFGSASEDDKLYPCQNVECPQSELSMGFLDKNMRLDHEALCAYRTEDSQVPFHRYLSNEASPITSLDDWMNLAIQNDAKVLEAAGGSGTLEDDVCYWLNGVENLELQAALEILVKDNQDFDQEDATSIWDLP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03313 440 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 357 IPR006957 GO:0003700|GO:0005634
Viun1g03313 440 FunFam Ethylene insensitive 3-like 1 141 278 - -
Viun1g03313 440 Pfam Ethylene insensitive 3 31 269 IPR047091 GO:0003700
Viun1g03313 440 SUPERFAMILY DNA-binding domain of EIN3-like 147 271 IPR023278 GO:0003700|GO:0005634
Viun1g03313 440 Coils Coil 15 35 - -
Viun1g03313 440 Gene3D - 140 277 IPR023278 GO:0003700|GO:0005634
Viun1g03313 440 Gene3D - 59 138 IPR023278 GO:0003700|GO:0005634
Viun1g03313 440 MobiDBLite consensus disorder prediction 48 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03313 Viun-Chr1 40706013 40707539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03313 15 381 EIL Transcription Factor Family AT5G10120 52.972 8.87e-134 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Viun1g03313 EIN3 5.4e-114 No_clan