Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00489 ATGAGAGGAAATGTGCATTCTCACATCACACACTCACAGTTTCAGAGAGTGAGAAAAAGGTTTAGAGTTATTCCAATGGCCACTCTTGTTCTTCATCATCAAACTTCTCCTGCTCAAGATGCTGAGGCTCTTCATCAAGCTTTCAAAGGATGGGGTTCTGATGGCAAGGCAATTATAGCAATACTGGGTCACAGAAATGTTCATCAGAGACAGGAAATCAGAAGGGCTTATGAAGAGATCTACCAAGAGAATCTCATCAAACGCCTTGAGTCAGAGATTTCTGGTGATTTTGAGAGAGCTGTGTATCGTTGGATGTTGGAGCCTGCAGATCGTGATGCTGTTTTGATGAATGTAGCAATAAAAAATGGTCCAAAAGAGTATAATGTGATCGCAGAGATTGCTAGTGTTCTTTCAGCCAAAGAACTCTTAGCTGTGAGGTGTGCTTACCATGATCGCTACAAACGTTCTTTGGAAGAAGATGTGGCAGCACACACCACTGGTCACCTTCGTCAGCTTTTGGTTGGATTGGTGAGTTCATATAGGTATGAGGGTGATGAGATCAATGTAAAATTGGCACAGACTGAAGCTAATATTCTCCATGAATCAATCAAGGAGAAGAAAACCAACTATGAAGAAGTTACCAGAATTCTTACCACAAGAAGCAAAACTCAACTTGTTGCAACTTTCAACCGCTACAGAGATGAACATGGAATTTCCATCAGTAAGAAATTGGTGGATCAGTCATCTGATGATTTTGTGAAGGTATTGCACACAGTGATTCGTTGCGTCAATGACCATAAAAAGTACTATGAGAAGGTTTTGCGCAATGCAATAAAAAAGTTTGGAACTGATGAAGATGGGTTGACTCGTGTGATTGTAACAAGAGCTGAGAAAGATTTGAAGGACATCAAAGAGGTGTACTACAAGAGGAACAGTGTTCATCTTGAAGATGCTGTGTCAAAGGAAATCTCAGGAGACTACAAGAGGTTCATGCTCGCACTTCTGGGGAACCAAGACTAA 1020 0.4108 MRGNVHSHITHSQFQRVRKRFRVIPMATLVLHHQTSPAQDAEALHQAFKGWGSDGKAIIAILGHRNVHQRQEIRRAYEEIYQENLIKRLESEISGDFERAVYRWMLEPADRDAVLMNVAIKNGPKEYNVIAEIASVLSAKELLAVRCAYHDRYKRSLEEDVAAHTTGHLRQLLVGLVSSYRYEGDEINVKLAQTEANILHESIKEKKTNYEEVTRILTTRSKTQLVATFNRYRDEHGISISKKLVDQSSDDFVKVLHTVIRCVNDHKKYYEKVLRNAIKKFGTDEDGLTRVIVTRAEKDLKDIKEVYYKRNSVHLEDAVSKEISGDYKRFMLALLGNQD 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00489 339 Gene3D Annexin 189 264 IPR037104 GO:0005509|GO:0005544
Viun1g00489 339 PRINTS Annexin family signature 49 71 IPR001464 GO:0005509|GO:0005544
Viun1g00489 339 PRINTS Annexin family signature 322 335 IPR001464 GO:0005509|GO:0005544
Viun1g00489 339 PRINTS Annexin family signature 198 224 IPR001464 GO:0005509|GO:0005544
Viun1g00489 339 PRINTS Annexin family signature 89 105 IPR001464 GO:0005509|GO:0005544
Viun1g00489 339 PRINTS Annexin family signature 278 298 IPR001464 GO:0005509|GO:0005544
Viun1g00489 339 Gene3D Annexin 107 178 IPR037104 GO:0005509|GO:0005544
Viun1g00489 339 Gene3D Annexin 266 339 IPR037104 GO:0005509|GO:0005544
Viun1g00489 339 SMART annex3 282 334 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 SMART annex3 123 176 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 SMART annex3 207 259 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 SMART annex3 52 104 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 FunFam Annexin 26 106 - -
Viun1g00489 339 Gene3D Annexin 22 106 IPR037104 GO:0005509|GO:0005544
Viun1g00489 339 ProSiteProfiles Annexin repeat profile. 265 336 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 SUPERFAMILY Annexin 28 339 IPR037104 GO:0005509|GO:0005544
Viun1g00489 339 FunFam Annexin 107 177 - -
Viun1g00489 339 ProSiteProfiles Annexin repeat profile. 107 178 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 ProSiteProfiles Annexin repeat profile. 190 261 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 PANTHER ANNEXIN 28 334 - -
Viun1g00489 339 ProSitePatterns Annexin repeat signature. 282 334 IPR018252 GO:0005509|GO:0005544
Viun1g00489 339 PRINTS Plant annexin signature 185 205 IPR009118 -
Viun1g00489 339 PRINTS Plant annexin signature 143 157 IPR009118 -
Viun1g00489 339 PRINTS Plant annexin signature 250 268 IPR009118 -
Viun1g00489 339 ProSiteProfiles Annexin repeat profile. 35 106 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 FunFam Annexin 190 264 - -
Viun1g00489 339 Pfam Annexin 39 101 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 Pfam Annexin 112 176 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 Pfam Annexin 272 334 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 Pfam Annexin 196 257 IPR018502 GO:0005509|GO:0005544
Viun1g00489 339 FunFam Annexin 266 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00489 Viun-Chr1 3918400 3921677 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00489 1 3918400 3921677 Viun1g00489 1 3918400 3921677 ECH
Viun1g00489 1 3918400 3921677 Viun11g00122 11 839618 842508 PCT