Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00299 ATGAGTGCAGCTGAAGATCTTGTGAACAAAACAGAAGCTGGTGGAAAAGAAAGCCAGGACAACCACATCACAGGTCTTGTAAAAAACAATGATGGTGTAAATCCTGCAAATCACCAGGCAGCAGGTGGGGCAGAAAGACCTGTAAGTGACCAAACAGATGTTGACCGAAATCCTACAAGTGAACAAGTGGGTATTGCAGGAAATATGGTAAACAACCAAGCAGGTGCTGCAGAAACTCCCGCAAAGGAACACGTAACAGGTGGTGCGGAAAATTCTGTACACAATGAAGCAGGGGCATCAATAAGTGGTATGAAGGACGAAGCTGGTGTTATAGACAGTCCTGTAAACAGCATTGTAACTGCTGCAGAAATTTCTGTAAGCAGCCAAGCAGATGCTGCAGCAAACAGAAAAGAAAATCCAGTTGAAACCCCTGTAGCCTGCAAAGCAGATCGCCTTCCGGAAGAAGCACAGGAGATGCTGAAATCATTGGCTAGTCACTGGGAGGATGTACTTGATGCAAATGCATTGCAGGTCTTCCCTCTCAAAGGAGCAATGACGAATGAGGTATTTCAGATAAAGTGGCCAACTTCGACAGGAGAAACTTCACGAAAGGTTATTGTTAGAATTTATGGTGAGGGTGTGGACGTGTTCTTTGATAGGAGTCAAGAGATTCAAACATTTGAATTTATGTCAAAGAACGGGCAAGGTCCTCCTCTACTAGGACGGTTTGCAAATGGTCGTGTTGAAGAGTTTATCCACGCACGGACATTATCAGCAGCTGATCTACGTGATCCTACCATTTCTGCTCTTATAGCGGCTAAATTGAAGGATTTTCATGATTTAGATATGCCTGGTGAAAAGGAAGTCCACCTTTGGAATAAATTGCGAAATTGGCTTAGTGAGGCCAAACGTATATCATCCCCTAAAGAAGCTGAAGCATTTTATTTGGACACAATAGACAAAGAAATCACCCTTTTGGAAAAGGAACTATCAGGCTCACACCAAATGATAGGATTTTGTCACAACGATTTACAATATGGTAACATAATGCTTGATGAAGAGACCAATTCTGTGACCATCATAGACTATGAATACGCTTGCTATAATCCAGTAGCATTTGATATAGCCAACCACTTCTGTGAGATGGCTGCTAACTATCACACAGAAGAGCCTCATATCCTTGACTACAGTAAATATCCTGATCTTAAGGAGCGTAAAAGATTTGTGCTGGCATACTTGAGTGCCTCTGATGGCAGTGAAGTGGAGCAACTACTTCAAGAAATTGAGAAGTATACACTTGCAAATCATCTATTCTGGGGCGTTTGGGGAATAATCTCGGCACAAGTAAACACAATCCACTTTGACTACAAGGAGTATGCTAAACAGAGGTTTCAAGAGTACTGGGCAAGGAAACCTTATCTTCTAATAAACTCCGAAGCACCTTCTCCGTATAATGTGCCCGAGGGTACAGGAGAACTAGCATCAGCTCCCAGCCACAAATCGAAGAACTCTAGTATCTTCAGGAGGATGAAGAAAGTTTTTGGTCTGGGTTTGTTCAGGTCTAAGAGCTAG 1572 0.4275 MSAAEDLVNKTEAGGKESQDNHITGLVKNNDGVNPANHQAAGGAERPVSDQTDVDRNPTSEQVGIAGNMVNNQAGAAETPAKEHVTGGAENSVHNEAGASISGMKDEAGVIDSPVNSIVTAAEISVSSQADAAANRKENPVETPVACKADRLPEEAQEMLKSLASHWEDVLDANALQVFPLKGAMTNEVFQIKWPTSTGETSRKVIVRIYGEGVDVFFDRSQEIQTFEFMSKNGQGPPLLGRFANGRVEEFIHARTLSAADLRDPTISALIAAKLKDFHDLDMPGEKEVHLWNKLRNWLSEAKRISSPKEAEAFYLDTIDKEITLLEKELSGSHQMIGFCHNDLQYGNIMLDEETNSVTIIDYEYACYNPVAFDIANHFCEMAANYHTEEPHILDYSKYPDLKERKRFVLAYLSASDGSEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIHFDYKEYAKQRFQEYWARKPYLLINSEAPSPYNVPEGTGELASAPSHKSKNSSIFRRMKKVFGLGLFRSKS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00299 523 Gene3D Phosphorylase Kinase; domain 1 164 251 - -
Viun1g00299 523 PANTHER CHOLINE/ETHANOALAMINE KINASE 130 476 - -
Viun1g00299 523 CDD ETNK_euk 176 470 - -
Viun1g00299 523 Gene3D - 211 468 - -
Viun1g00299 523 MobiDBLite consensus disorder prediction 22 36 - -
Viun1g00299 523 MobiDBLite consensus disorder prediction 1 62 - -
Viun1g00299 523 Pfam Choline/ethanolamine kinase 202 403 - -
Viun1g00299 523 SUPERFAMILY Protein kinase-like (PK-like) 149 475 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00299 Viun-Chr1 1851565 1858021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00299 141 479 Acyl Lipid Metabolism Gene Families AT1G74320 65.015 4.54e-173 490
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00299 1 1851565 1858021 Viun1g00299 1 1851565 1858021 ECH
Viun1g00299 1 1851565 1858021 Viun11g00271 11 2285137 2288918 PCT