Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00281 ATGGTGCAGCAAAAGAAGCTAGTTGATGAAGTGTCCGGTTGGCTCAGAATCTACGATGACGGTTCGGTGGACCGGACATGGACCGGACCGGAACAGTTCAAGTTTATGGCTGACCCGGTTCTTCCTCATGAGAAATTTATTGATGGTATTGCTGTTCGTGATACCATCATTTCTCGTGAAGGCCATGACCTTCGTGTTCGATTATACTTGCCGGAAAATGCATTGGAAAATAAAAAAAAATTACCCATTATTCTTCATTTTCAGGGTGGTGGGTTTTGCATCAGTGAACCGGACTGGTTCATGTACTACCAAATTTACGTTCGAGTTGCCTTATCAGCTCAGGCCATTGTAGTTTCTCCTTTCCTCCGCCGTGCACCGGAGCACCGTCTCCCAGCCGCCACTGATGACGCCTTTGACACCCTCCTCTGGCTCCAATCTGTGGCCCGGTCCGGTTCGAATGAACCGTGGCTCGAGCAACATGGGGACTTCAACCGGGTTTTCCTCATAGGGGACAGCTCTGGCGGGAACGTGGTGCATGAGGTGGCTTCAAGGGCCGGTTCGGCGGATCTAAGCCCGGTTCGGGTTGCAGGAGCGATCCCGGTTCACCCCGGGTTTGTCCGGTCGGAGCGGAGCCGGTCGGAGCTGGAAATGCCGCAATCACCGTTTTTAACGTTGGACATGCTGGACAAGTTCCTAGAGTTAGCACTGCCGGTGGGGGCGACGAAGGACCACCCGATGACGTGCCCGATGGGCGCGGCGGCACCGGCGCTTGAAGGGCTGAAACTGCCGCCGGTGCTGCTGTGCGTGGCGGAGATGGACTTGGTGAGGGATACGGAGATGGAGTATTATGAGGCGCTGAAGAAAGCGAAGAAGGAGGTGGAACTTTATGTGAGTGATGGAATGAGTCATAGTTTTTATTTGAATAAGGTTGCTGTGGATTTGGACCCCAATGTTAGTGCAAAAACCGATGCTTTCATCACCAGGATCAAGGACTTCATTCAGCAGCACTGA 1011 0.5292 MVQQKKLVDEVSGWLRIYDDGSVDRTWTGPEQFKFMADPVLPHEKFIDGIAVRDTIISREGHDLRVRLYLPENALENKKKLPIILHFQGGGFCISEPDWFMYYQIYVRVALSAQAIVVSPFLRRAPEHRLPAATDDAFDTLLWLQSVARSGSNEPWLEQHGDFNRVFLIGDSSGGNVVHEVASRAGSADLSPVRVAGAIPVHPGFVRSERSRSELEMPQSPFLTLDMLDKFLELALPVGATKDHPMTCPMGAAAPALEGLKLPPVLLCVAEMDLVRDTEMEYYEALKKAKKEVELYVSDGMSHSFYLNKVAVDLDPNVSAKTDAFITRIKDFIQQH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00281 336 Gene3D alpha/beta hydrolase 15 336 IPR029058 -
Viun1g00281 336 PANTHER ARYLACETAMIDE DEACETYLASE 9 307 - -
Viun1g00281 336 SUPERFAMILY alpha/beta-Hydrolases 7 336 IPR029058 -
Viun1g00281 336 Pfam alpha/beta hydrolase fold 84 306 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00281 Viun-Chr1 1791330 1792708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00281 7 326 Carbohydrate Esterase AT1G68620 32.515 2.95e-53 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00281 1 1791330 1792708 Viun1g00281 1 1791330 1792708 ECH
Viun1g00281 1 1791330 1792708 Viun11g00272 11 2291250 2292412 PCT