Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00223 ATGGATTCTACGGATGATGACAGAATGAGTGGTGCTAACTATGATGGTGATGATCCTTACGTTGAAGAAGAAACGATGAGGGTGGAAGAAGAAGCAGAAGAAGATGATGAAGAAGAAGAAGAAGTGGTGACATTGGAGGAACTGGAGACAAGGATGTGGAGAGATCGCATGATGTTGAGGAAGCTGAAGGAAGAGAAGAGGGAAAAGGAGAAAGGAGAAACAGTGGAGATGATGAAGAAGAAGACACTGATTCGTGCACAAGACACAGTGCTGAAGAACATGGTGAAGATGATGAAGATTTGTGGTGTTCGTGGCTTCGTTTATGGCATCATTCCTGAGAAGGGAAAACCAGTGAGTGGAGCTTCTGATAACCTCAGAGGTTGGTGGAAGGACAGGGTCAAGTTTGATCACAATGGTCCTGCTGCTATGCTCAGGTACGAGGAAGAAACTGGTTTTGAAGACATGGTTAGTGATGCATTCAACGGAGAGCCATCAACAACAGCACACAGTTTGAACGATCTCCCAGACACAACTCTTGGATCACTCTTGTCATGTCTCATGCAGAACTGTGACCCTCCGCAGAGAAGGTACCCTCTGGACAAGGGCATAGCCCCTCCCTGGTGGCCCACTGGGCAGGAATGGTGGTGGGCCCAGATGGGCTTTACCATGGACCCAGGCCCACCACCCTACAAGAAGCCCCATGACCTGAAGAAGGTGTGGAAGATGTGTGTGCTTACTGCAGTCATCAAGCACATATCCCCAGACATGGCAAAGATCAGAAACATCGTTCGTCACTCTAGGACCCTTCAGGACAAGCTCAATGCAAAAGAAACTGCCATTTGGAGCGCTATTGTGAAGCGTGAAGAGTCCTTTGCTAGGAGATCATACCCTAATAATTTCTTCCAAACCCTCCCTCTAAGAGCAGGACCTACTGTCCATTATGATAATAGGGGGCAACAAAGTAATAACCTTGGTGGTGCAATGAATCTTCTTGGGGGCCTCAATAACATACCACAACACAACAATGTTGGTAATGGTGGTTCTTGGAGCTTTCTCGGTGGCCAGAATAACCCTTCAACTTCCACCAGTGCTGCTAGAATTCTTCTTGGGAACCCTCCATCAACCACCGATTTGATCACTGATGATGGTGCTACTAGTTTTCCTGCACCACCCACCAATGGTGGAGCTAGAAATTTCTTCGATCCACCAACACCAACGAGCAATATTCTGGTTCATAGTGAACTCATGAGAGCTTTTTTGGATGGCCAATATAACCCACCCCCACCACTACCATCAACAACAGCAATAACAATGATGAACAATGGCATTGTTATGCCACTAGATCATGCTGGTGATAAGAGAAAGGGTGGTGATGATTTTCATGGTATTGTTACATTTCCTCAAGAGGCATATTCTTGCCACATCACAGAGTGCCCTTATCATCATGAGACTGGCTTTGGATTCAGTGACAGAAACGCGAGGAACAATCATCAGCTAACATGCCGATACAGAAGCAAAAATCAGAATTTTACTGTTGGGGACATGAATGCTCCTTCTCTTGCAGGCCAAAACCAGTATTTGCAAACTGTTCAGACTCAGGTGTGGAATGATAGTTTGTTTGATGGAAGGATTTGTTTGGACAAGGATGTCTTTGGCAACAACATGTATGTGTGTTCTCTAGAAAGCAAAAACCAGCAGCAGCAGGTGAAAAATGTTGGTAATGCTGAAGTGTCCAATGTTGTCCATGGGAATATGTCAGTGGATTCTTCCTTTGCATGGGATTCAAACAATTCCCAAGCTGAATTTTTGGACTCTCCTATGTTTGTAACACCAGACCAGGATCTCCTTTGGCCATAA 1857 0.455 MDSTDDDRMSGANYDGDDPYVEEETMRVEEEAEEDDEEEEEVVTLEELETRMWRDRMMLRKLKEEKREKEKGETVEMMKKKTLIRAQDTVLKNMVKMMKICGVRGFVYGIIPEKGKPVSGASDNLRGWWKDRVKFDHNGPAAMLRYEEETGFEDMVSDAFNGEPSTTAHSLNDLPDTTLGSLLSCLMQNCDPPQRRYPLDKGIAPPWWPTGQEWWWAQMGFTMDPGPPPYKKPHDLKKVWKMCVLTAVIKHISPDMAKIRNIVRHSRTLQDKLNAKETAIWSAIVKREESFARRSYPNNFFQTLPLRAGPTVHYDNRGQQSNNLGGAMNLLGGLNNIPQHNNVGNGGSWSFLGGQNNPSTSTSAARILLGNPPSTTDLITDDGATSFPAPPTNGGARNFFDPPTPTSNILVHSELMRAFLDGQYNPPPPLPSTTAITMMNNGIVMPLDHAGDKRKGGDDFHGIVTFPQEAYSCHITECPYHHETGFGFSDRNARNNHQLTCRYRSKNQNFTVGDMNAPSLAGQNQYLQTVQTQVWNDSLFDGRICLDKDVFGNNMYVCSLESKNQQQQVKNVGNAEVSNVVHGNMSVDSSFAWDSNNSQAEFLDSPMFVTPDQDLLWP 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00223 618 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Viun1g00223 618 FunFam Ethylene insensitive 3-like 1 162 299 - -
Viun1g00223 618 Coils Coil 20 65 - -
Viun1g00223 618 SUPERFAMILY DNA-binding domain of EIN3-like 168 292 IPR023278 GO:0003700|GO:0005634
Viun1g00223 618 MobiDBLite consensus disorder prediction 1 43 - -
Viun1g00223 618 MobiDBLite consensus disorder prediction 17 43 - -
Viun1g00223 618 Pfam Ethylene insensitive 3 46 289 IPR047091 GO:0003700
Viun1g00223 618 Gene3D - 166 299 IPR023278 GO:0003700|GO:0005634
Viun1g00223 618 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 28 309 IPR006957 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00223 Viun-Chr1 1386323 1388663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00223 453 504 EIL Transcription Factor Family AT2G27050 40.385 1.39e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Viun1g00223 EIN3 3.9e-104 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00223 1 1386323 1388663 Viun1g00223 1 1386323 1388663 ECH