Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02186 ATGGCTGACAAAGATAGCGTTTATGCACCAGAAAATAAGAGGAGAGCTCCAATTTTCAGTTTCTTTAAAGATGCTAGACTAGTTTTCAAATATGACAGTCTTGGTTGTGAAATATTATCAATTGCATTGCCTTCAGCACTGGCTTTGATAGCTGACCCTGTTGCTTCACTGGTTGACACAGCATTTATTGGTCAAATAGGTCCAGTGGAGCTTGCAGCTGTAGGGGTGGCCATAGCACTCTTCAATCAGATATCAAGAATTGCAATATTCCCACTTGTCAGTGTCACTACCTCTTTTGTGGCAGAGGAAGATACCCTTTCTGGAGACACTCCTCAAGAAGTAGAGAAGAATGAATGGTTGGAGGCAGCTCCAATTATGGATGCTGAAATAAAAGAACTAATACCACTTAACATAGATTTGACTGCTATTGACTGTAATATAGCTAAGTTTGAGCATAAGAGAAGGCAAATCCCTTCTGCTTCTTCAGCATTACTAATCGGTGGCATTCTTGGCATCATCCAAACAGTGTTCCTCATATCTGCTGCAAAACCTTTATTGAACTTCATGGGAGTAACCTCAGACTCTCTTATGCTACACCATGCACATAAGTACCTGACATTGAGGTCCCTTGGTGCTCCTGCTGTTCTTCTCTCTTTAGCAATGCAGGGAATCTTCCGAGGATTTAAAGACACTAGAACACCTTTATATGCCACATTGGCAGGAGATTTGACCAATGTAGCACTTGATCCTTTATTCATATTTGTTTTTCGGTTGGGGGTCAGTGGTGCAGCTATTGCTCATGTCATATCTCAGTACCTAATGTCACTTATACTCCTGTGGTGCTTGATGGAAAAAGTTGATCTTATACCACCAAGCATCAAGCATTTACAATTTCATCGATTCCTTAAAAATGGTTTTCTGCTATTTGTAAGAGTAATTGCTGTGACATTCTGTGTGACACTGGCAGCATCATTAGCTGCACGCAAGGGACCAACATCCATGGCTGCATTTCAAGTCTGTCTGCAGATTTGGTTAGCAGTGTCCCTTCTTGCTGACGGTCTCGCTGTTGCTGCACAGGCTATTCTTGCAGGTGCATTTGCAAACAAGGACTATGAGAAGGCCGAAGCAACTGCATATCGAGTATTACAGCTGGGTTTGGTTCTGGGGTTTGCTCTTGCATTCATTCTTGGAATAGGACTGCTTCTTGGAGCTAAACTATTTACCAGAGATGTTCATGTCCTTCACCTCATCAGAATTGGAATCCCGTTTGTAGCAGCCACTCAACCCCTCAACGCTTTGGCATTTGTATTTGATGGAATCAACTTCGGGGCATCTGATTTTGCATATTCAGCCATTTCTTTGGTTGTGGTGGCAATTTCCAGCATAATTTGTCTGCTTTTTTTATCATCTGTTGGCGGTTTCATAGGAATTTGGGTTGCTTTAACAATCTATATGGCTCTTAGAGCAATTGTGGGCATTCTGAGGGTTGGAACTGGATCAGGACCCTGGAAGATGATTAGGAGCTAA 1527 0.4224 MADKDSVYAPENKRRAPIFSFFKDARLVFKYDSLGCEILSIALPSALALIADPVASLVDTAFIGQIGPVELAAVGVAIALFNQISRIAIFPLVSVTTSFVAEEDTLSGDTPQEVEKNEWLEAAPIMDAEIKELIPLNIDLTAIDCNIAKFEHKRRQIPSASSALLIGGILGIIQTVFLISAAKPLLNFMGVTSDSLMLHHAHKYLTLRSLGAPAVLLSLAMQGIFRGFKDTRTPLYATLAGDLTNVALDPLFIFVFRLGVSGAAIAHVISQYLMSLILLWCLMEKVDLIPPSIKHLQFHRFLKNGFLLFVRVIAVTFCVTLAASLAARKGPTSMAAFQVCLQIWLAVSLLADGLAVAAQAILAGAFANKDYEKAEATAYRVLQLGLVLGFALAFILGIGLLLGAKLFTRDVHVLHLIRIGIPFVAATQPLNALAFVFDGINFGASDFAYSAISLVVVAISSIICLLFLSSVGGFIGIWVALTIYMALRAIVGILRVGTGSGPWKMIRS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02186 508 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 9 507 IPR044644 -
Viun11g02186 508 Pfam MatE 160 251 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun11g02186 508 Pfam MatE 309 463 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun11g02186 508 CDD MATE_DinF_like 37 498 IPR044644 -
Viun11g02186 508 NCBIfam MATE family efflux transporter 44 478 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02186 Viun-Chr11 36769344 36773220 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03600 5 45444242 45448915 Viun11g02186 11 36769344 36773220 PCT