Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02118 ATGGTTTTCTCCTCTATTCCAGTCTTTGTAGATCCTCCCAATTGGCACCAGCAACCCAACCATGCTCAGGCCAATGGCAGTGACAACGCTCAGCTTCTTCCACCGTTGCCACCGCAGCAGGCTCATGTCGGAGCTTCCGTGGGATCAATCAGGCCAGGTTCCATGGCTGATCGAGCTAGGCTAGCTAAGATACCTCCTCCTGAAGCAGCTCTCAAGTGTCCACGTTGTGAATCCACCAACACTAAATTTTGCTACTTCAACAACTATAGCCTCTCTCAGCCACGCCACTTCTGCAAAACTTGCCGGCGTTACTGGACACGAGGGGGTGCTCTTAGAAACGTTCCTGTGGGTGGAGGCTGCCGTAGGAACAAGAAGAACAAAAGGAGCCGCTCTAAGTCTCCGGCATCATCTGACAAACAAACACTGTCTGGTTCTTCCGGTGCACTCCCCCCCTCCGCTGGAAACACTCACGAGCTTATGGGCCAGTTGCCGCAACCGCCGAACCTTCCCTTCATGGCGTCGCTCCAGAACCTGAACCGTTATGCTGTCGGAAACATGGGTCTCGGGTTGCGTGAGATTCACGGACAGAACGATCACATGGGGTTTCAAATTGGTGGCAGCGGTAATCCCTCTGCCGGTGGAGGAATGGATCAGTGGCGCTTGCAGCAGATTCCTTTCTTGAATGGCTTTGAATCTGCTGCTTCAGCTGGTTCATACCATTTTCAAAACGAAAGTATCGAAACACCTTCTGCTTTGGTTGGGGATTTAGCATCGAATTCTAGGGTTTCTCAGATGCCACCAGTTAAAATGGAAGAAAGTGGGGCTTTGAATTTGTCAAGATCACCACTGAACGTCTCAGAAAATAACCACTACTATTCATGGACTGATATGTCAGGTCTTTCCTCTTCTTCTGCTACTCATCTCTTGTAA 930 0.5032 MVFSSIPVFVDPPNWHQQPNHAQANGSDNAQLLPPLPPQQAHVGASVGSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPASSDKQTLSGSSGALPPSAGNTHELMGQLPQPPNLPFMASLQNLNRYAVGNMGLGLREIHGQNDHMGFQIGGSGNPSAGGGMDQWRLQQIPFLNGFESAASAGSYHFQNESIETPSALVGDLASNSRVSQMPPVKMEESGALNLSRSPLNVSENNHYYSWTDMSGLSSSSATHLL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02118 309 MobiDBLite consensus disorder prediction 135 162 - -
Viun11g02118 309 MobiDBLite consensus disorder prediction 13 32 - -
Viun11g02118 309 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
Viun11g02118 309 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 50 228 IPR045174 GO:0003700|GO:0006355
Viun11g02118 309 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Viun11g02118 309 Pfam Dof domain, zinc finger 70 125 IPR003851 GO:0003677|GO:0006355
Viun11g02118 309 MobiDBLite consensus disorder prediction 16 32 - -
Viun11g02118 309 MobiDBLite consensus disorder prediction 115 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02118 Viun-Chr11 36409914 36411637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02118 37 308 C2C2-Dof Transcription Factor Family AT3G55370 44.702 1.84e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Viun11g02118 zf-Dof 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02118 - - gmx:100816635 508.449