Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00275 ATGGCCGCCACGCCTCCTTCCTTTTCCCCCTCTCGCACCACCTGCGCCTCTCTCCTCCGCGAATTGCAGATAATATGGGATGAGATTGGGGACAGTGACAATGATAGAGACAACATGCTTCTTCAACTGGAGCAAGAATGCCTGGACATTTATCACCGGAGAGTTGAGGAGACGAGGAAGCACAAGGCTGACATGTATCAGTGGTTGGCAGATGCTGAAGCTCAAGCAACTAATATTGTTTCTTCCCTTGGGGAATCTACGGTGCTCCCACGGGGAAAGGGATCCTTGAAGCAGCAAATAGCTACCATTAAACCTGTCTTAGAGGATTTGAGGTCAAAGAAGGATGAAAGAATCAAGGAATTTTTAAAGATAAAGTCCCAAATTTCTCAGATATGTGATGAAATAGCAGGTTGTGGACAGTACACGAGTGTCACAGACTCAGATGTTAATCAAAGTGATCTGACATCAAAGAAATTGGGGGAACTCAAGTCGCATCTACAGGAGCTTCAGAATGAAAAGATATTACGTCAGCAGAAAGTGAAGAGTCATATCAGTACTATTAGTGAGCTTACAGAAGTAATGTCAATTGATTTTAGGAAGACATTAAATGAAATTCACCCAAGTCTGGATGATTCATTAAAAGGTACACTACAGAGCATCAGCAATGACACGCTTGCAAGATTAACCGGGGTTATTCATTCATTAAAGAGGGAGAAGCAACAAAGGCTACAAAAGATGCAAGAGCTTGCTAAATTGCTGGTAGAGCTTTGGGATCTCATGGAGACACCAACTGAAGAGAAAAAGGAGTTTAGCCATGTTACTCGATTAATTTCAGCATCAGCGGATGAAGTGTCAACTCGTGGTTGTCTTTCTTCAGAAGTCATTGAGCAGGTTGAAGGTGAAGTCCAGCGGTTAAATGTTGTCAAAGCTAGTAAGATAAAGGATTTGGTGTTTAAGAGGCAGAATGAGCTTGAAAATATTTACAGAGGAGTTCACATGCATGTCGATAGTGAATCTGCAAGACAGATTTTGACTAGCCTCATTGAATCTGGTAATGTTGATCTGTCTGATTTGCTTCAAAACATGGATGGTCAAATAAGACAAGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATCTTAGATAGGACAGAGAAATGGAAATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATACGAAAGGGATGAAAATCGATATACTGCTGTAAGAGGAGCACACAAAAATTTGAAACGTGCTGAGAAAGCTCGGATTCTTGTCAGCAGGATTCCATCTATTGTTGAGAATTTGACTACAAAAGTGAGAGCGTGGGAAATGGAAAAAGGAATACCTTTCTTGTATGAAAAGATACCATTGTTACATAGCTTGGATGAATATATTGTACAACGACAACTCAGAGAAGAAGAGAAACGCAAATATCGGGAGCAGAAACGGCTACAAGAACAAGCAGCTGTAGAGCAAGAAACACTTTTTGGTTCCAGGTCTGCAACAAAGAAGCCTCTGAGTCAGAGCAACAACGCCAACACCATAACAGGGACACCAACCGGCCGTAGACTGCTTACTCCCTCCGGACGCCATGGAACCTCTGGAGGAAAGGAACGCAGAGAAAGTGGCAGAGTGAACACCATAATTCCAGTGAACTATGTTGCTCTTCCAAAAGATGATTCTGTTTCTAGGGGTAATTGA 1704 0.4231 MAATPPSFSPSRTTCASLLRELQIIWDEIGDSDNDRDNMLLQLEQECLDIYHRRVEETRKHKADMYQWLADAEAQATNIVSSLGESTVLPRGKGSLKQQIATIKPVLEDLRSKKDERIKEFLKIKSQISQICDEIAGCGQYTSVTDSDVNQSDLTSKKLGELKSHLQELQNEKILRQQKVKSHISTISELTEVMSIDFRKTLNEIHPSLDDSLKGTLQSISNDTLARLTGVIHSLKREKQQRLQKMQELAKLLVELWDLMETPTEEKKEFSHVTRLISASADEVSTRGCLSSEVIEQVEGEVQRLNVVKASKIKDLVFKRQNELENIYRGVHMHVDSESARQILTSLIESGNVDLSDLLQNMDGQIRQAKEQALSRRDILDRTEKWKFAAEEEKWLDEYERDENRYTAVRGAHKNLKRAEKARILVSRIPSIVENLTTKVRAWEMEKGIPFLYEKIPLLHSLDEYIVQRQLREEEKRKYREQKRLQEQAAVEQETLFGSRSATKKPLSQSNNANTITGTPTGRRLLTPSGRHGTSGGKERRESGRVNTIIPVNYVALPKDDSVSRGN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00275 567 Coils Coil 232 256 - -
Viun11g00275 567 Gene3D - 366 499 - -
Viun11g00275 567 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 563 IPR007145 GO:0000226|GO:0008017
Viun11g00275 567 MobiDBLite consensus disorder prediction 495 524 - -
Viun11g00275 567 Coils Coil 462 488 - -
Viun11g00275 567 Coils Coil 152 172 - -
Viun11g00275 567 MobiDBLite consensus disorder prediction 495 547 - -
Viun11g00275 567 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 508 - -
Viun11g00275 567 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00275 Viun-Chr11 2332455 2339721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00275 13 533 EF-hand Containing Proteins AT5G62250 37.363 6.80e-98 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00275 11 2332455 2339721 Viun11g00275 11 2332455 2339721 ECH