Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00272 ATGGTCCACCAGAAGAAGCTCGTGGATGAAGTGTCCGGTTGGCTTAGACTCTACGATGACGGTTCGGTAGACCGGACATGGACCGGTCCACCAGAGGTCAAATTCATGGTCGAACCGGTTCCTGCCCATGACGAATTCCTCAATGGAGTTGCTGTTCGTGATACTGTAACGAACAACAATGTCCGTGTACGACTTTACTTGCCGGAGAAAGTCTCCAACGAGGAGAAACTTCCCATCTTTCTTCACTTTCACGGTGGCGGGTTCTGCATAAGTGAACCGGATTGGTTCATGTACTATCAGTTTTACTCAGAACTCGCTCGGTTAGCTCGAGTCATCGTTGTGTCTTGTTTCCTTCGTCATGCTCCAGAAAATCGTCTTCCTGCAGCAATCGACGACGGTTTTTCTGCTCTTCTCTGGGTACATGATGTAGCCGGAAGAGAAACGGAAGAGCCGTGGCTTGAAAAACACGGTGATTTTCGTCGTGTTTTTCTGATCGGAGATAGCTCCGGTGCGAATATTGTGCATGAAGTGGCTGCACGAGCTGGGAAGACTCAACTGAAACAGATAAGCGTAGCCGGAGGGATCCCAATTCATCCGGGGGTGATGAGGTCGACGCGGAGCAGGTCAGAGTTGGAGAAACCGCAATCTCCATTTTTGACTTTGGAGATGGTGGACAAGTTCATGAGCTTGGCATTGCCATTGGGTTCAACCAAGGACCACCCCATTGCGTGCCCCATGGGTGACGGCGCTCCGCCGCTGAGCGGGCTGAAACTGCCGCCGTTTCTGCTGTGCCTGGCGGAGATGGACTTGATCTTTGACACAGAGATGGAGTACTACGAAGCCATGCGGAAGGCCAACAAGGATGTGGAGTTGTTTGTTAACGAAGGAGTGACTCATAGTTTCTATCTCAACAAAATTGCTGTGGATATGGATCCAAATACTGGTGCTCAAACGCATGCTCTTATTGCTAGAATCAAACGGTTCGTTGAAGAGCATTAA 999 0.5005 MVHQKKLVDEVSGWLRLYDDGSVDRTWTGPPEVKFMVEPVPAHDEFLNGVAVRDTVTNNNVRVRLYLPEKVSNEEKLPIFLHFHGGGFCISEPDWFMYYQFYSELARLARVIVVSCFLRHAPENRLPAAIDDGFSALLWVHDVAGRETEEPWLEKHGDFRRVFLIGDSSGANIVHEVAARAGKTQLKQISVAGGIPIHPGVMRSTRSRSELEKPQSPFLTLEMVDKFMSLALPLGSTKDHPIACPMGDGAPPLSGLKLPPFLLCLAEMDLIFDTEMEYYEAMRKANKDVELFVNEGVTHSFYLNKIAVDMDPNTGAQTHALIARIKRFVEEH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00272 332 Pfam alpha/beta hydrolase fold 81 302 IPR013094 GO:0016787
Viun11g00272 332 SUPERFAMILY alpha/beta-Hydrolases 7 331 IPR029058 -
Viun11g00272 332 Gene3D alpha/beta hydrolase 5 330 IPR029058 -
Viun11g00272 332 PANTHER ARYLACETAMIDE DEACETYLASE 9 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00272 Viun-Chr11 2291250 2292412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00272 7 330 Carbohydrate Esterase AT5G16080 33.631 2.55e-53 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00272 11 2291250 2292412 Viun11g00272 11 2291250 2292412 ECH
Viun1g00281 1 1791330 1792708 Viun11g00272 11 2291250 2292412 PCT