Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00271 ATGGTGACTTTTGTTCTGGGGGCGGCAGAAGAGGCCACACCAAATCCTGTGAATAACAAAGCTGTTGATGCAGAAAATGTAGTTAGTAGTGATCATGCAGAGATTCCAGGTAGTAGTGAAATAAAGGGCACAGAAGTTCCTAAAGAAACCTCTGCCAAAGAAGGAGAATATTCCATTCCTAGTGAAGCAACTGAGATACTGAAATCATTGGCAGCTAAATGGGAGAATGTAATCGATGCCAATGCATTGAAAATAATCCCTCTTAAAGGGGCAATGACAAATGAGGTTTACCAGATAAAATGGAAGACAACAGAAGGAGAATCCTCAAGAAAGGTTCTGACAAGAATCTATGGCGAGGGCACTGCTTTTTTCTTTGATAGGGGAGTTGAGGTCAAGACATTTGAATTTATGTCAAAGAGTGGACAAGGGCCTCGTTTGCTTGGAAGGTTTGATAATGGTCGCATTGAGGAATTCATCCATGCAAGGACATTATCAGCATCTGATCTGCGAGAGCCATCTACTTCTGCCCTCATAGCAGCCAAAATGAAGGAGTTTCATGATATTGATATGCCTGGTCAAAAGACTGTGAACCTTTGGGATAGGTTAAGAGATTGGCTTAAGGAAGCCAAACGCTTGAGTTCTCCTGAAGATGTTGAAGCATTTAAATTGAACAGTTTGGACAATGAAATATCTACTTTGGAAAAAGAATTATCAGGCTCTAAGCAATGCATAGGATTTTGCCACAACGATTTGCAATATGGTAACATAATGCTTGATGAAGAGTCCTGTTCTGTCACCCTTATCGATTATGAATATGCAAGTTACAATCCTGTGGCCTATGATATAGCAAACCACTTCAATGAGATGGCTGCCAATTATCACACAGATACTCCACATGTTCTTGACTTCACTAAATACCCTGATTTGGAAGAGCGTCGACGATTTGTCCAAGCATATTTGAGTTCCTCAGGTGAGCAACCTAGTGACACTGAAGTACAGCAATTGGTTGATGAAGTTGAGAAGTATGCACTTGCAAGCCATCTATTGTGGGGCATTTGGGGAGTAATTTCGTTGCATGTAAATAAAATTGAGTTTAAGTACAGGGAATATGCAGAACAGAGGTTCCAACAGTATTGGTCAAGGAAAACTCCTGTTGTGAGCTCTAATGACTCTTCTGATCATGATAATGGCCTGCAAGCAGCAGCATCGACCACTCACCATAGAGCAGGTAGGCTCATTGGTATCCCTAGGAGATTGAAGAGATTGTTTAATCTTGGTTTTTTCAGATCGAAACACTAG 1299 0.4103 MVTFVLGAAEEATPNPVNNKAVDAENVVSSDHAEIPGSSEIKGTEVPKETSAKEGEYSIPSEATEILKSLAAKWENVIDANALKIIPLKGAMTNEVYQIKWKTTEGESSRKVLTRIYGEGTAFFFDRGVEVKTFEFMSKSGQGPRLLGRFDNGRIEEFIHARTLSASDLREPSTSALIAAKMKEFHDIDMPGQKTVNLWDRLRDWLKEAKRLSSPEDVEAFKLNSLDNEISTLEKELSGSKQCIGFCHNDLQYGNIMLDEESCSVTLIDYEYASYNPVAYDIANHFNEMAANYHTDTPHVLDFTKYPDLEERRRFVQAYLSSSGEQPSDTEVQQLVDEVEKYALASHLLWGIWGVISLHVNKIEFKYREYAEQRFQQYWSRKTPVVSSNDSSDHDNGLQAAASTTHHRAGRLIGIPRRLKRLFNLGFFRSKH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00271 432 MobiDBLite consensus disorder prediction 386 403 - -
Viun11g00271 432 PANTHER CHOLINE/ETHANOALAMINE KINASE 47 385 - -
Viun11g00271 432 MobiDBLite consensus disorder prediction 30 57 - -
Viun11g00271 432 Pfam Choline/ethanolamine kinase 109 310 - -
Viun11g00271 432 SUPERFAMILY Protein kinase-like (PK-like) 58 382 IPR011009 -
Viun11g00271 432 Gene3D - 118 379 - -
Viun11g00271 432 MobiDBLite consensus disorder prediction 386 405 - -
Viun11g00271 432 CDD ETNK_euk 83 381 - -
Viun11g00271 432 Gene3D Phosphorylase Kinase; domain 1 71 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00271 Viun-Chr11 2285137 2288918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00271 49 390 Acyl Lipid Metabolism Gene Families AT1G74320 61.111 7.79e-167 471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00271 11 2285137 2288918 Viun11g00271 11 2285137 2288918 ECH
Viun1g00299 1 1851565 1858021 Viun11g00271 11 2285137 2288918 PCT