Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00243 ATGGCTACCCAGGCAATAGCTGAAACTGCACAAAAAATTGTCAACCCTGAAGCCCTTCGCTATGCAGCCAAACAATCACAGCGCTGCCTTGTTATTCCTGTCCGTCTCCGTCGTGCCATTAAAAAATACCTTCAAGAGCAGGATGAGCCATATATGAAGAGGAAAGTCTTGAGACTGTCTCAATCATTTAATCAAATCAAGGATGTCAATCTACAGTTGGCAAGCACCACAGCAAAGAAGATAGTTGAAGACCCTTTAAAGTCTCTCGAACAATCAAAACGTTGGAAAATTACGAGCTCTTATGGGGACATTGGTCTCATGTATAGAGATGATGAGACAATTGCTTATGTGGCTTCTAGAATGCCTGCTGTCTACTCTGCTTGTTACAGAGTACTTAAAGAGGTTCGCAGAAGGCTTCCTGGTTTCTCCCCATCTAAGGTATTAGATTTTGGTGCCGGGACTGGTTCAGCTTTCTGGGCACTACAAGAAGTTTGGCCAAAATCTTTGGAGAAAGTTAATTTAATAGAACCATCGCAATCAATGCAGCGTGCAGGTCGGAGCCTTATACAAGGTCTCAAGAATTTGCCACTTATTCATAGCTATGATAGCATTCAATCACTTTCTAAAAGTCTTGGTAAATCAGACAGAGGGCATGACCTTGTAATTGCTTCTTATGTTCTTGGAGAGATTCCATCAATAAAGGATCGAATAACCATAGTTCGCCAACTTTGGGATCTAACAAGTGATCTTCTGGTCTTGGTTGAACCAGGAACACCTCATGGATCTAATATTATTGCTCAGATGAGATCTCACATATTATGGATGGAAGAAAGAAAATATCGTAAAGCATCTCATAAGAATAATGAAATTTCTAAAGATTTGATCACTCAGAAGTCTGGTGCGTTCGTGGTTGCACCTTGTCCTCATGATGGAATTTGTCCGCTGGTAAAATCTGGAAAATATTGTCATTTTGTTCAACGCTTAGAGAGGACATCATCGCAACGTGCCTACAAGCGTTCAAAGGGTGATCCTTTACGTGGTTTTGAAGATGAGAAATTTTCCTATGTTGTTTTTAGACGTGGACCAAGGCCAAGGGAACCTTGGCCCCTTGACGGTGTGGAATTTGAGACTCTGAAGGAGCAGCATGCAAAAAGAAAACCAGAGGATCTTGAAATTGACTATGAGGACTGGTTGAAGTTGCAACAAGCTGATGATACTCTTCATGAAGTAGCTGATGCAGCAGATGATTTGGAAACTGGTGACACTTCTTGTGAAGCAGTTAAGGCTGTACGTTATGATTCTGATGCTGTGGAAACTGATGGTGATGATGATAGTGACAATGACTACGAAAGGAGAGAAGAGAGAGACAGTGCTGATTTTGGAGGTGGCTGGGGCAGGATTATCTTCATGCCTGTCAGAAGGGGTAGACAGGTGACAATGAATGTGTGCAGATCCACCAAAAAGGATGCTTCAGAGGGTTCATATGATCGTATTGTCGTCACAAAGAGCACGAACCCTACCTTGCATCATCAGGCCAAAAGATCTATCTGGGGTGACCTGTGGCCCTTTTGA 1572 0.4249 MATQAIAETAQKIVNPEALRYAAKQSQRCLVIPVRLRRAIKKYLQEQDEPYMKRKVLRLSQSFNQIKDVNLQLASTTAKKIVEDPLKSLEQSKRWKITSSYGDIGLMYRDDETIAYVASRMPAVYSACYRVLKEVRRRLPGFSPSKVLDFGAGTGSAFWALQEVWPKSLEKVNLIEPSQSMQRAGRSLIQGLKNLPLIHSYDSIQSLSKSLGKSDRGHDLVIASYVLGEIPSIKDRITIVRQLWDLTSDLLVLVEPGTPHGSNIIAQMRSHILWMEERKYRKASHKNNEISKDLITQKSGAFVVAPCPHDGICPLVKSGKYCHFVQRLERTSSQRAYKRSKGDPLRGFEDEKFSYVVFRRGPRPREPWPLDGVEFETLKEQHAKRKPEDLEIDYEDWLKLQQADDTLHEVADAADDLETGDTSCEAVKAVRYDSDAVETDGDDDSDNDYERREERDSADFGGGWGRIIFMPVRRGRQVTMNVCRSTKKDASEGSYDRIVVTKSTNPTLHHQAKRSIWGDLWPF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00243 523 MobiDBLite consensus disorder prediction 433 457 - -
Viun11g00243 523 Pfam Mitochondrial small ribosomal subunit Rsm22 288 522 IPR015324 GO:0006412|GO:0008168
Viun11g00243 523 Pfam Mitochondrial small ribosomal subunit Rsm22 112 279 IPR015324 GO:0006412|GO:0008168
Viun11g00243 523 Gene3D Vaccinia Virus protein VP39 108 295 IPR029063 -
Viun11g00243 523 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 271 IPR029063 -
Viun11g00243 523 PANTHER 37S RIBOSOMAL PROTEIN S22 23 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00243 Viun-Chr11 1957153 1965274 Tandem