Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00197 ATGGCTGCTTCGGTTGCAGGGAGCGCGACCACGAACACGAGCGCGGGTGTGGAGTGGCACGTGCGTCCTCCAAACCCTAAGAACCCAATCGTCTTCTTCGATGTCACCATCGGCAACATACCCGCTGGTCGAATCAAGATGGAACTCTTCGCCGACATTGCGCCCAAAACCGCCGAGAATTTCAGGCAGTTCTGCACTGGGGAGTACAGAAAAGCTGGACTTCCGGTTGGTTACAAGGGTTGTCAATTTCATAGAGTGATTAAGGATTTTATGATTCAAGCTGGTGATTTTGTAAAGGGTGATGGTAGTGGATGTGTTTCAATCTATGGACTTAAGCTTGATGATGAAAACTTTATTGCCAAACACACTGGCCCTGGTCTTCTGTCGATGGCAAATAGTGGACCAAATACCAATGGTTGTCAGTTTTTCATAACATGCGCAAAATGCGACTGGCTTGACAACAAGCATGTCGTTTTTGGGAGAGTGCTTGGAGATGGCCTTTTGGTTGTGAGGAAGATTGAGAATGTGGCAACTGGACCCAATAACCGGCCAAAATTAGCTTGTGTCATTGCAGAATGTGGTGAAATGTAA 591 0.4721 MAASVAGSATTNTSAGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGLKLDDENFIAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00197 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 49 64 IPR002130 GO:0000413|GO:0003755
Viun11g00197 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 153 IPR002130 GO:0000413|GO:0003755
Viun11g00197 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Viun11g00197 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 154 169 IPR002130 GO:0000413|GO:0003755
Viun11g00197 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 95 IPR002130 GO:0000413|GO:0003755
Viun11g00197 196 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 31 196 - -
Viun11g00197 196 PIRSF Peptidylpro_ismrse 9 196 IPR024936 GO:0003755
Viun11g00197 196 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 32 195 IPR002130 GO:0000413|GO:0003755
Viun11g00197 196 FunFam Peptidyl-prolyl cis-trans isomerase 18 196 - -
Viun11g00197 196 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 194 IPR002130 GO:0000413|GO:0003755
Viun11g00197 196 Gene3D - 18 196 IPR029000 -
Viun11g00197 196 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 78 95 IPR020892 GO:0003755|GO:0006457
Viun11g00197 196 CDD cyclophilin_ABH_like 29 194 - -
Viun11g00197 196 SUPERFAMILY Cyclophilin-like 19 196 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00197 Viun-Chr11 1525408 1530438 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00197 11 1525408 1530438 Viun11g00197 11 1525408 1530438 ECH