Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00171 ATGTCTGAATTGGTGGCGCGTACGGGGCGGCATCAGCAGCGCTACGAGAACGGTTATCGTCTTGTTGCTGGGTGTGTTCCATTTAGATATAAAAGTTCTAATGGTGACTCCAGTTCCGAGAAGATTGTTCAAGTGCTTATGATTAATTCACCAAGTGGACCTGGTCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGACGAAACTGTTGAGGAGGCAGCTGCAAGGGAAGCTGTAGAAGAAGCAGGAGTTAGAGGAGACCTAATGGATTTTCTTGGATATTATGAGTTTAGGAGTAAGACCCATCAAGACGAGTTTAGTCCCGAAGGTTTATGTAGAGCAGCAATGTTTGCATTGTTTGTGAAGGAGGAACTTGAGTTATGGCCCGAGCAAAGCACCAGAAATCGGAGTTGGCTAGATGTGTCGGAGGCACTTGAAAGCCTCCGGCATGCATGGATGAGGGACGCCCTGGAATGCTTCTGTAAATGGCACGAGGATAAGTTGAATGAAATGAAAGGATGA 519 0.4644 MSELVARTGRHQQRYENGYRLVAGCVPFRYKSSNGDSSSEKIVQVLMINSPSGPGLLFPKGGWENDETVEEAAAREAVEEAGVRGDLMDFLGYYEFRSKTHQDEFSPEGLCRAAMFALFVKEELELWPEQSTRNRSWLDVSEALESLRHAWMRDALECFCKWHEDKLNEMKG 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00171 172 FunFam Nudix hydrolase 16, mitochondrial 5 159 - -
Viun11g00171 172 SUPERFAMILY Nudix 10 162 IPR015797 -
Viun11g00171 172 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 161 - -
Viun11g00171 172 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 162 - -
Viun11g00171 172 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Viun11g00171 172 ProSiteProfiles Nudix hydrolase domain profile. 18 160 IPR000086 -
Viun11g00171 172 Pfam NUDIX domain 45 156 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00171 Viun-Chr11 1419693 1424027 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00171 11 1419693 1424027 Viun11g00171 11 1419693 1424027 ECH