Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00166 ATGACCATGAAAACCTCACCTATGCTCACTCCTCTGCTGCTCTTCCTCCTCTTCTCCCTAGCCAAAGCACTGAACCCTAACTGTGATGTCCATGACCATGGCTCTACCCTTAAAGTGTTCCATGTGTTCAGCCCTTGTTCCCCATTCCGACCCTCAGAGGGTCTCTCATGGGAGGAGAGTGTCCTACAGCTAGAAGCCAAGGACCATGCCAGGATGCAGTACCTTTGGAGCTTGGTAGCTAGAAGGTCGATTGTCCCAATTGCCTCGGGGAGACAAATCACGCAGAGCCCTACGTACATTGTTAAGGCCAAGATTGGTACCCCTCCTCAGACCCTTCTCTTGGCCATGGACACCAGCAACGACGCTGCTTGGGTCCCTTGCACTTCCTGCGTTGGTTGCTCCACTCTCAAACCCTTTGCCCCTGCCAAATCCACCACCTTCCACAACCTTCCATGTTCTGCTCCTCAGTGCAAACAGGTACCGAACCCCACTTGCGGTGGAAGCGCGTGTGCTTTCAACTTCACTTATGGCACTTCCTCTGTGGCAGCTGGTCTTGTACAGGACACAGTTACCCTAGCCACCGACCCAGTTCCAGGCTACACCTTTGGGTGCGTTCAAAAGGCAACAGGGAGCTCAATTCCAACACAGGGCCTGTTGGGCCTGGGCCGAGGCCCATTGTCACTCTTGGCCCAAACCCATCATCTCTACCAGTCTACCTTCTCCTACTGCTTGCCCAGCTTCAAAACACTCAACTTCAGTGGGTCACTGAGACTTGGGCCTGTGGCCCAGCCCAAGAGGATCAAGTTCACCCCTCTTCTCAAAAACCCTAGAAGGTCATCACTGTATTATGTGAACTTGGTGGCTGTTAGAGTTGGCCGGAGAATCGTCGATATCCCGCCGGAGGCTTTGGCGTTCAACCCCACCACCGGTGCCGGCACCATTTTCGATTCCGGTACGGTGTTCACCCGGCTGGTTGAACCGGCCTACACCGCCGTCCGGAACGAGTTCCGGCGGCGAGTCAGCGTCGGGAAGAAACTCACCGTGACAAGGCTGGGAGGGTTTGACACATGCTACACGGTCCCGATAGTTGCACCAACCATAACGTTTATGTTCTCCGGCATGAACGTGACACTCACGCCGGACAACACCCTCATACACAGCACCGCCGGCGGCATCACGTGTTTGGCGATGGCGGCGGCGCCCGACAACGTGAACTCGGTGCTGAACGTGATCGCCAACATGCAGCAACAAAACCACCGTGTGCTCTACGACGTGCCCAACTCAAGGCTCGGTGTTGCTCGTGAACTTTGCACCTAA 1317 0.5543 MTMKTSPMLTPLLLFLLFSLAKALNPNCDVHDHGSTLKVFHVFSPCSPFRPSEGLSWEESVLQLEAKDHARMQYLWSLVARRSIVPIASGRQITQSPTYIVKAKIGTPPQTLLLAMDTSNDAAWVPCTSCVGCSTLKPFAPAKSTTFHNLPCSAPQCKQVPNPTCGGSACAFNFTYGTSSVAAGLVQDTVTLATDPVPGYTFGCVQKATGSSIPTQGLLGLGRGPLSLLAQTHHLYQSTFSYCLPSFKTLNFSGSLRLGPVAQPKRIKFTPLLKNPRRSSLYYVNLVAVRVGRRIVDIPPEALAFNPTTGAGTIFDSGTVFTRLVEPAYTAVRNEFRRRVSVGKKLTVTRLGGFDTCYTVPIVAPTITFMFSGMNVTLTPDNTLIHSTAGGITCLAMAAAPDNVNSVLNVIANMQQQNHRVLYDVPNSRLGVARELCT 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00166 438 Gene3D Acid Proteases 260 438 IPR021109 -
Viun11g00166 438 Gene3D Acid Proteases 79 259 IPR021109 -
Viun11g00166 438 ProSiteProfiles Peptidase family A1 domain profile. 99 433 IPR033121 -
Viun11g00166 438 FunFam Aspartyl protease AED3 260 438 - -
Viun11g00166 438 Pfam Xylanase inhibitor C-terminal 282 431 IPR032799 -
Viun11g00166 438 Pfam Xylanase inhibitor N-terminal 99 259 IPR032861 -
Viun11g00166 438 FunFam aspartyl protease AED3 77 259 - -
Viun11g00166 438 SUPERFAMILY Acid proteases 97 437 IPR021109 -
Viun11g00166 438 PANTHER ASPARTYL PROTEASES 14 431 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00166 Viun-Chr11 1379097 1382648 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00166 11 1379097 1382648 Viun11g00166 11 1379097 1382648 ECH