Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00155 ATGAACATGTTAGGCCTCAGAGACTTGGTTCTCATAGCTCCAACCCCTTCTCAACTTCACCACCATCAACACCAACACCAGCACCAGCACCACCAGCACCAACACCAGCCCATTTCAGCAGAACACCACCCAAACCTTCCCTTGCCTTCTCCAGCATCTCTCAGCGTTGGCCTTGGCATTTTCCCTCTGCTAACAGTTCCACACACCAACGATGTTCATGATCAGGTTCAGAACTGTGCCAACAACACCACCACCACCACCAACGCCACCACCACCAACCACAACGCCAATTACTGGAACCTCAAGATGTGTGGTGTCTCTGAAGTGAATTCCACAAGAAAAGGTGTCATGAACGTGGAAGATGAGGGCAGCAACAAGCACGTGATGGAGAGTGAGGAAAGTGGTGAGTTTAGGGTGTGCCAGGATTGTGGCAATAGGGCCAAGAGGGATTGCAGCTACAAGAGGTGCAGGACTTGTTGCAAAGGACGTGGCTTTGATTGCAGCACTCACGTGAAGAGCACGTGGGTCCCAGCCTCTCTCAGACGCAGTGGTGCTAACAGTGGCAGTGAAGGTAACGGTGATGGAGATGGTGATGGTGGTGCTTCCAAGAGGCTAAGAACAATAGGGTCATCCAAGAATGTTGCAGCTACTTCTCTCAGTTCAACTTCCAATGCTACCCCCTCAAAGAGCTTTAGCTTAGACACTAGCTCATGCCAACAAGATGCTGGTTTCAAGCAATCTTTGCCACGGCATGTGCGTGCACCTGCTGTGTTTAGGTGCCACAGAGTTTCTGCTATTGGGAGTGGTGAAGATGAGATTGCATACTTGGCCACAGTGCATATCAGTGGCCATGTGTTCAAGGGGTTTCTGTATGATCATGGTGCTGATGCCAGAAATGATGTGCCTAGTGTCTCTGAACTGCAACTGGGAAACAATGGAAGTGGAAAGAGTAATAATAGGGAATGTTCTTCTGCAATTGGGGTTCCAACCAGTGCTTACCCTGCTTCTGTTTGCTGA 1017 0.4985 MNMLGLRDLVLIAPTPSQLHHHQHQHQHQHHQHQHQPISAEHHPNLPLPSPASLSVGLGIFPLLTVPHTNDVHDQVQNCANNTTTTTNATTTNHNANYWNLKMCGVSEVNSTRKGVMNVEDEGSNKHVMESEESGEFRVCQDCGNRAKRDCSYKRCRTCCKGRGFDCSTHVKSTWVPASLRRSGANSGSEGNGDGDGDGGASKRLRTIGSSKNVAATSLSSTSNATPSKSFSLDTSSCQQDAGFKQSLPRHVRAPAVFRCHRVSAIGSGEDEIAYLATVHISGHVFKGFLYDHGADARNDVPSVSELQLGNNGSGKSNNRECSSAIGVPTSAYPASVC 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00155 338 MobiDBLite consensus disorder prediction 206 232 - -
Viun11g00155 338 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 21 324 IPR007818 GO:0003700|GO:0006355
Viun11g00155 338 MobiDBLite consensus disorder prediction 178 232 - -
Viun11g00155 338 MobiDBLite consensus disorder prediction 17 46 - -
Viun11g00155 338 NCBIfam putative zinc finger domain, LRP1 type 139 180 IPR006510 -
Viun11g00155 338 Pfam Domain of unknown function (DUF702) 139 296 - -
Viun11g00155 338 NCBIfam LRP1 C-terminal domain 248 294 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00155 Viun-Chr11 1265015 1269850 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Viun11g00155 DUF702 1.8e-52 No_clan