Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun11g00146 | ATGGCGGAAACCGCAATTTTCTTCGCCGCCACCGGAGAACCTCCTCTGCTACGATTCTTCAACAGCACCTTTCTCTACGTCAAACGGAACCTCATCGCTCACATTCTCCGCTCCCTAAACGACGCCTTCTCACACCACAGGATTTGCTGCGACGTCGACGCAGCGGTCGAGAAAAAGTGCGAGGTGTACGCGGGAGATTCCTCGTCGAACGACACGAGTTTCGGCGCCGACGAGAATGGACGGCACGCCGTTTTCAATGTGCTGGATACTATGCTTAAGGATAGTTTAGAGCGGCTGAAGATGATGAGGGAAAATCTATGTTTGGTAAAGATAGGTCTAACTATGGGATATGCTTGTGAATTCAAGTATGCTGAACATACAGCTACTATTAGGAGTTTGTGCTTGGAAAGTAAGTTGGGAGCAGCTCTTTGGCTTCGAAGGAAAATGGTTATGAAAGGTGTTGCTCCTGATGTGTTTACCCACAACCATATTGTAAACGGGCTGTGCAAAAGTGGTTTTCTGGAGAAAGCAGATTGGATTGTTAGAGAGATGCTAGCATTTGGTCCTGGTCCCAATTGCGCGACTTATAACACTTTGATCAAGGGCTATTGCACTGTTAATGACATGGACAGGGCTTTGTTTCTATTCTCCACCATGTCCAATGCTGGGGTTCTGCCAAACAGGGTTACTTGTAATATACTGGTGCGTGCTCTGTGTGAGAAAGGTCTTCTAAAGGGAGCTAAAAGGATGCTCGAAGAAATATTGAAGGATGATGACGAGAAAGATATAACTGATTTAGTGACCTCTACTATATTTATGGATAACTACTTTAAGAGAGGAGCAATTATTCAGGCTATTAGTCTTTGGAATGAGATGGTTCAAAATTGTACTAAAGTTGATGTTGTAGCTTATAATGTTCTTATCCATGGATTTTGCAAGAGTCTACAAATGAACCTTGCATATGGATATGCATGCGAGATGTATAAGAAAGGTTTACTTCCTGATGTTTTTACGTATAATATTCTTATCGGTGCTCTTTGCAAGGAAGGTAAAATTAGTGAGGCTTGCTATACCCTTGGAGTCATGTCTAGTATGGGAATTATGCCTGATGAAATTACATACCAGCTTGTGATTCGAGGCCTTTGTTTTGATGGAGAGATTGCTAGAGCAAAAAGCTTGCTTAGGTCTATGTTGAACAATTTAATAGTGCCCAAGCCTTTAATATGGAACCTACTAATTGACTTCTACGGACGATATAATGATCTTAGCAATGCACTTTTTACAAGAGATCAGATGCTAGCTTTTGGTGTTCACCCAAATGTATTTACTTACAATGCTTTAATTCTTGCACAAGTGAAAGATGACAATTTCTATGGTGCTTGCTCTCTGAAGGAAGAGATGCTTTCAAAGGATATTTTTCCTGATGTGGTTACCTATAATTTATTGATAGGTGCTGCCTGTAACTTAGGACGTCCTGATTTTGCTCTTCAATTACATGATGAGATGGTGCGGAGAGGGTATGAACCAGATTTAATAACTTATACTGAAATTGTTAGGGTGTTCTGTATTAGAGGTAAGATGAAAGAGGCAGAGGAGCTATATGGCAAAATACTAAAATCTGGTTTATTGAATGATCATGTTCCAGTGCAGATTCTATTTAACAAATACTGCAACTTAGAGGAACCAGTTAGAGCATTTAATTTCTATCAAGACTGGTTAGAAAGTAAAAGGGGCAGTCATCCGTATTACATTTGA | 1755 | 0.4068 | MAETAIFFAATGEPPLLRFFNSTFLYVKRNLIAHILRSLNDAFSHHRICCDVDAAVEKKCEVYAGDSSSNDTSFGADENGRHAVFNVLDTMLKDSLERLKMMRENLCLVKIGLTMGYACEFKYAEHTATIRSLCLESKLGAALWLRRKMVMKGVAPDVFTHNHIVNGLCKSGFLEKADWIVREMLAFGPGPNCATYNTLIKGYCTVNDMDRALFLFSTMSNAGVLPNRVTCNILVRALCEKGLLKGAKRMLEEILKDDDEKDITDLVTSTIFMDNYFKRGAIIQAISLWNEMVQNCTKVDVVAYNVLIHGFCKSLQMNLAYGYACEMYKKGLLPDVFTYNILIGALCKEGKISEACYTLGVMSSMGIMPDEITYQLVIRGLCFDGEIARAKSLLRSMLNNLIVPKPLIWNLLIDFYGRYNDLSNALFTRDQMLAFGVHPNVFTYNALILAQVKDDNFYGACSLKEEMLSKDIFPDVVTYNLLIGAACNLGRPDFALQLHDEMVRRGYEPDLITYTEIVRVFCIRGKMKEAEELYGKILKSGLLNDHVPVQILFNKYCNLEEPVRAFNFYQDWLESKRGSHPYYI | 584 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun11g00146 | 584 | NCBIfam | pentatricopeptide repeat | 195 | 227 | IPR002885 | - | |
| Viun11g00146 | 584 | NCBIfam | pentatricopeptide repeat | 512 | 542 | IPR002885 | - | |
| Viun11g00146 | 584 | NCBIfam | pentatricopeptide repeat | 477 | 510 | IPR002885 | - | |
| Viun11g00146 | 584 | NCBIfam | pentatricopeptide repeat | 337 | 371 | IPR002885 | - | |
| Viun11g00146 | 584 | NCBIfam | pentatricopeptide repeat | 159 | 192 | IPR002885 | - | |
| Viun11g00146 | 584 | NCBIfam | pentatricopeptide repeat | 229 | 257 | IPR002885 | - | |
| Viun11g00146 | 584 | NCBIfam | pentatricopeptide repeat | 302 | 336 | IPR002885 | - | |
| Viun11g00146 | 584 | NCBIfam | pentatricopeptide repeat | 442 | 476 | IPR002885 | - | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 440 | 474 | IPR002885 | - | |
| Viun11g00146 | 584 | Gene3D | Tetratricopeptide repeat domain | 85 | 259 | IPR011990 | GO:0005515 | |
| Viun11g00146 | 584 | Gene3D | Tetratricopeptide repeat domain | 260 | 324 | IPR011990 | GO:0005515 | |
| Viun11g00146 | 584 | Gene3D | Tetratricopeptide repeat domain | 325 | 402 | IPR011990 | GO:0005515 | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 192 | 226 | IPR002885 | - | |
| Viun11g00146 | 584 | Pfam | PPR repeat family | 300 | 348 | IPR002885 | - | |
| Viun11g00146 | 584 | Pfam | PPR repeat family | 474 | 522 | IPR002885 | - | |
| Viun11g00146 | 584 | Pfam | PPR repeat family | 191 | 239 | IPR002885 | - | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 335 | 369 | IPR002885 | - | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 510 | 544 | IPR002885 | - | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 300 | 334 | IPR002885 | - | |
| Viun11g00146 | 584 | Gene3D | Tetratricopeptide repeat domain | 410 | 582 | IPR011990 | GO:0005515 | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 227 | 261 | IPR002885 | - | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 370 | 404 | IPR002885 | - | |
| Viun11g00146 | 584 | Pfam | PPR repeat | 267 | 295 | IPR002885 | - | |
| Viun11g00146 | 584 | Pfam | PPR repeat | 408 | 437 | IPR002885 | - | |
| Viun11g00146 | 584 | Pfam | PPR repeat | 442 | 472 | IPR002885 | - | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 475 | 509 | IPR002885 | - | |
| Viun11g00146 | 584 | PANTHER | MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 | 264 | 574 | - | - | |
| Viun11g00146 | 584 | Pfam | PPR repeat | 365 | 397 | IPR002885 | - | |
| Viun11g00146 | 584 | Pfam | PPR repeat | 152 | 184 | IPR002885 | - | |
| Viun11g00146 | 584 | SUPERFAMILY | TPR-like | 171 | 574 | IPR011990 | GO:0005515 | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 405 | 439 | IPR002885 | - | |
| Viun11g00146 | 584 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 157 | 191 | IPR002885 | - |