Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00144 ATGGCTATGGCTTTAGAGACTCAGTTCCATGTTCTGGCTGTTGATGACAGTCTCATTGACAGAATGTTGATTGAAAGACTCTTGAAAACCTCTTCCTTCAATGTTACTACAGTTGATTCTGCTACCAAGGCCTTGAAGTTTCTTGGTTTGGTTGAAGATGAGTTGAGGAATTTTGAATCTTCTGTTGCATCAGAAATTCATCAGGATGTTGTAGATGTTAACCTGATTATAACAGATTACTGTATGCCAGGAATGACTGGTTATGATCTTCTGAGAAAAATCAAGGAATCTAAATCACTTAAAAACATACCAGTTGTGATTATGTCCTCTGAGAATGTGCCATCAAGGATCAATAGATGTTTGGAAGAAGGAGCAGAAGAATTTTTTCTGAAACCAGTTCAACAAGCAGATGTGAATAAGCTGAAGCCACATTTGATGAAATCAAAAAGTAAAGAAGAAAATGAAGAATCATTGAAGAACAAGAGAAAGGATATGGAAGAAATTTATTCTCCAAACAAAACCAGATTGAGATGTAGCAGTTAG 543 0.3591 MAMALETQFHVLAVDDSLIDRMLIERLLKTSSFNVTTVDSATKALKFLGLVEDELRNFESSVASEIHQDVVDVNLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLKPHLMKSKSKEENEESLKNKRKDMEEIYSPNKTRLRCSS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00144 180 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 161 IPR045279 GO:0009736
Viun11g00144 180 SMART REC_2 9 145 IPR001789 GO:0000160
Viun11g00144 180 CDD REC_typeA_ARR 11 141 - -
Viun11g00144 180 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Viun11g00144 180 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Viun11g00144 180 Gene3D - 10 177 - -
Viun11g00144 180 MobiDBLite consensus disorder prediction 145 180 - -
Viun11g00144 180 Coils Coil 148 168 - -
Viun11g00144 180 MobiDBLite consensus disorder prediction 145 171 - -
Viun11g00144 180 SUPERFAMILY CheY-like 8 141 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00144 Viun-Chr11 1118447 1120334 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun11g00144 Response_reg 4.1e-19 CL0304