Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00142 ATGATGTATAATGATCCGCAGCACCAGCAGCACCAGTACCAGCAGCAGCAGCCGCCGCCGCATTTCCACCACCAGCCGCCGGGTCAGGAGTTCCACCGCGGACCTCCGCCGTCATCACAGGCGCCTCCGGTGATGCGGCAAGGCTCCGCTTCGTCGACGAACCTGGCTCCCGAGTTTCACCACCCCGGCCCCGGAGGACCCCCTCCTCCTCATTACGATGTTCACAGTGATGGCCATGGTGCTAAAAGAATACGAAAGCTTACTCAAAGGAAAGCAGTTGATTATACAAGCACAGTCGTGCGTTATATGCAGGTTCGTATGTGGCAGCGGGATTCAAGGGATAGGACAGTATTGCAGCCTACCCCAGCAGCAGCAATTGATATGTTGCCAGCAGTTGGCTATCCAGACAACCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGCCCCATTAATCGCGTTCTTTGGACTCCAACAGGCCGGCGACTTATTACTGGCTCACAGACTGGGGAATTCACTCTTTGGAATGGACAATCTTTTAATTTTGAAATGATTCTTCAGGCTCATGATCAAGCAATCAGGTCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTCTGTAGGACAGATTTGAAGTTCTGTTCATGCTCTGATGATACCACCGTTAAGGTTTGGGATTTTGCACGTTGTCAGGAAGAGTGCTCATTAACCGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCCCTTTTGGTATCAGGCGGGAAAGACAATCTTGTGAAACTTTGGGATGCTAAGACAGGGAAAGAGCTTTGCTCATTTCATGGGCACAAAAATACTGTGCTATGTGTCAAGTGGAACCAAAATGGCAACTGGGTGTTAACAGCTTCAAAGGATCAAATAATAAAGCTTTATGACATTAGAGCCATGAAGGAGCTTGAGTCATTCCGTGGACATCGCAAAGATGTTACTGCTTTGGCATGGCATCCATTCCATGAGGAGTACTTTGTGAGTGGGAGTTATGATGGTTCCATCTTCCATTGGCTTGTTGGGCATGAAACTCCCCAAATTGAAATTTCTAATGCCCATGATAATAACGTGTGGGATCTTGCATGGCATCCTATTGGATACCTTCTGTGCAGTGGCAGCAGTGATCATACAACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACACCCTTCGTGATAGATTTAACCCTGGCATGCAAGGATATGCTGATCCAAATCCTGTTGCTGGTCGGGTGGGTGGTAATTTTCCAATGGCCGAAGGCCCAACAACTCCAGGACCATTTGCCCCTGGGTTAACTCGAAACGAGGGCACCATTCCAGGTGTTGGAGTTGCAATGCCCTTATCTATTCCTTCTCTTGACATGCCTCAAGGGGAGCAGAAGCAGCCCCATCCTGTTTCAATGGGTGCTCCACCTCTTCCCCCAGGTCCACATCCCTCTCTTCTTAATGCCAACCAACAGCAACCATACCAACAGAATCCTCAGCAGATGCCGCCACAACATCAACACCAGGGTCTACCACAGCAGATGGGTCCTTTGCCAATGCCTCCAAACATGCCACAATTACAGCATCCTTCACATTCACCCATGGTCCCTCACCAGCATTTACCTCGCCCTCCTCCACAAATGCCTATTGGCCTGCCAGGATCTATACCAGGGATTTCATCAGTACCTACTTCACATCCGATGCCAATGCCTGGCCCTATGGGGATGCAAGGGGCAATGAATCAGATGGGTACTCCAATGCCACAAGGTCCTTATGTGGGCATGAATCAAATGCATTCAGGATCCTTGCCTACGAGTGGAGGGCCACCACTTGGTGGTTTTCCAGGCAACATGCCTAATATGCAAGGCCCATCAAGTGGCAATTATCCTCAAGGTGCTTCATTTAACAGACCTCAAGGTGGCCAAATGCCTTTGATGCAAGGGTATAATCCTTACCAGTCTGGTAATCAAACTGGGATGCCTCCAAACGCACAACCCTAG 2148 0.4856 MMYNDPQHQQHQYQQQQPPPHFHHQPPGQEFHRGPPPSSQAPPVMRQGSASSTNLAPEFHHPGPGGPPPPHYDVHSDGHGAKRIRKLTQRKAVDYTSTVVRYMQVRMWQRDSRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTLRDRFNPGMQGYADPNPVAGRVGGNFPMAEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLLNANQQQPYQQNPQQMPPQHQHQGLPQQMGPLPMPPNMPQLQHPSHSPMVPHQHLPRPPPQMPIGLPGSIPGISSVPTSHPMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLGGFPGNMPNMQGPSSGNYPQGASFNRPQGGQMPLMQGYNPYQSGNQTGMPPNAQP 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00142 715 Pfam WD domain, G-beta repeat 236 267 IPR001680 GO:0005515
Viun11g00142 715 Pfam WD domain, G-beta repeat 313 351 IPR001680 GO:0005515
Viun11g00142 715 Pfam WD domain, G-beta repeat 275 309 IPR001680 GO:0005515
Viun11g00142 715 Pfam WD domain, G-beta repeat 191 224 IPR001680 GO:0005515
Viun11g00142 715 Pfam WD domain, G-beta repeat 357 393 IPR001680 GO:0005515
Viun11g00142 715 Pfam WD domain, G-beta repeat 407 436 IPR001680 GO:0005515
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 319 353 - -
Viun11g00142 715 FunFam Flowering time control protein FY 309 446 - -
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 235 267 - -
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats profile. 193 225 IPR001680 GO:0005515
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 193 225 - -
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 405 436 - -
Viun11g00142 715 PANTHER WD40 REPEAT PROTEIN 21 707 IPR045245 GO:0031124
Viun11g00142 715 SUPERFAMILY WD40 repeat-like 147 436 IPR036322 GO:0005515
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 361 393 - -
Viun11g00142 715 MobiDBLite consensus disorder prediction 1 19 - -
Viun11g00142 715 MobiDBLite consensus disorder prediction 20 42 - -
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats profile. 319 360 IPR001680 GO:0005515
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats profile. 151 183 IPR001680 GO:0005515
Viun11g00142 715 FunFam Flowering time control protein FY 100 308 - -
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 318 IPR001680 GO:0005515
Viun11g00142 715 SMART WD40_4 139 183 IPR001680 GO:0005515
Viun11g00142 715 SMART WD40_4 312 351 IPR001680 GO:0005515
Viun11g00142 715 SMART WD40_4 354 394 IPR001680 GO:0005515
Viun11g00142 715 SMART WD40_4 397 437 IPR001680 GO:0005515
Viun11g00142 715 SMART WD40_4 270 309 IPR001680 GO:0005515
Viun11g00142 715 SMART WD40_4 186 225 IPR001680 GO:0005515
Viun11g00142 715 SMART WD40_4 228 267 IPR001680 GO:0005515
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 314 - -
Viun11g00142 715 ProSitePatterns Trp-Asp (WD) repeats signature. 296 310 IPR019775 -
Viun11g00142 715 MobiDBLite consensus disorder prediction 668 715 - -
Viun11g00142 715 PRINTS G protein beta WD-40 repeat signature 254 268 IPR020472 -
Viun11g00142 715 PRINTS G protein beta WD-40 repeat signature 296 310 IPR020472 -
Viun11g00142 715 PRINTS G protein beta WD-40 repeat signature 424 438 IPR020472 -
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats profile. 405 436 IPR001680 GO:0005515
Viun11g00142 715 CDD WD40 155 436 - -
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats profile. 235 267 IPR001680 GO:0005515
Viun11g00142 715 Gene3D - 103 309 IPR015943 GO:0005515
Viun11g00142 715 MobiDBLite consensus disorder prediction 488 594 - -
Viun11g00142 715 ProSiteProfiles Trp-Asp (WD) repeats profile. 361 393 IPR001680 GO:0005515
Viun11g00142 715 MobiDBLite consensus disorder prediction 648 715 - -
Viun11g00142 715 MobiDBLite consensus disorder prediction 1 80 - -
Viun11g00142 715 Gene3D - 310 444 IPR015943 GO:0005515
Viun11g00142 715 MobiDBLite consensus disorder prediction 534 561 - -