Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00138 ATGTCTATGCAGGATGAAAATTCTGATACAAAAGAAGTAATATGTCCCCAGAGAAGGCTAACAAATCTGATGCATCATGGTGGGAACAAGTTTTGTGCTGATTGCGGAACTCCAGAGCCAAAATGGGTATCTTCGAGTCTTGGAGTATTTATTTGCATCAAGTGTTCTGGCATACATAGAAGTCTAGGAGTCCACATATCAAAGGTTCTATCATTGAAGCTAGATGAATGGACAGATGAACAAGTTGATGCATTAGCAAAATTAGGAGGAAATACACTATTAAACAAGAAGTATGAAGCTTGCATCCCAAGTAACATGAGAAAACCAAAACCACATTCTTCCATTGAAGAGCGCTCTGAATATATTCGGAGAAAATATGAGATGCAACAGTTTATGGGGTGTGATGACAATGGGGCAGGCCCCATTGTCCCATCATCTCAAGGAAGAAGTGTATCACTTGCTCAGTGCAGCTCTTCATACTATCATTCTATTATAGACAAAAAACCATCTGAAAGATTTCCAGGCAGAAGTCGAATTGGGAATGCATTCCGAAATAGTTGGGGAAGAAAAGATTCTGAGCACAAGTCAAAGAAAAGTACATCATTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTGGTTAGAGGCACTCACCTAGCTGTTCGAGACGTGATGACTAGTGACCCTTATGTCATCCTTTCTTTGGGACACCAATCAGTAAAAACACGAGTCATAAAGAACAATTTGAATCCAGTGTGGAATGAAAGTCTAATGCTTTCAATTCCTGAGAACATTCCTCCTCTAAAAGTGCTTGTGTATGACAAGGATACATTTTCAACTGATGATTTCATGGGAGAGGCTGAAATAGACATTCAACCTCTAGTTATAGCTGCAAAGGCCTATGAGAAATCCAACATCAATGAGTCCATGCAACTTGGTAAATTTGTGGCAAGCAAGGACAACACCCTTGTTAGAGATGGTATCATATCCCTTGATGAAGGCAAGATCAAACAGGAGATCTCAGTGAGACTTCAGAACATTGAGAGAGGTGAACTTGAGCTTGAGCTTGAGTGTGTTCCTCTTACTCAATAG 1101 0.3996 MSMQDENSDTKEVICPQRRLTNLMHHGGNKFCADCGTPEPKWVSSSLGVFICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALAKLGGNTLLNKKYEACIPSNMRKPKPHSSIEERSEYIRRKYEMQQFMGCDDNGAGPIVPSSQGRSVSLAQCSSSYYHSIIDKKPSERFPGRSRIGNAFRNSWGRKDSEHKSKKSTSLAGMVEFVGLIKVNVVRGTHLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVIAAKAYEKSNINESMQLGKFVASKDNTLVRDGIISLDEGKIKQEISVRLQNIERGELELELECVPLTQ 366
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00138 366 CDD ArfGap 20 126 - -
Viun11g00138 366 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 208 366 - -
Viun11g00138 366 Pfam Putative GTPase activating protein for Arf 18 132 IPR001164 GO:0005096
Viun11g00138 366 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Viun11g00138 366 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Viun11g00138 366 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Viun11g00138 366 Gene3D Arf GTPase activating protein 2 137 IPR038508 -
Viun11g00138 366 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 13 366 IPR044518 GO:0005096|GO:0005543
Viun11g00138 366 SMART C2_3c 211 306 IPR000008 -
Viun11g00138 366 CDD C2_ArfGAP 209 353 - -
Viun11g00138 366 ProSiteProfiles C2 domain profile. 192 308 IPR000008 -
Viun11g00138 366 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 207 301 IPR035892 -
Viun11g00138 366 Pfam C2 domain 211 297 IPR000008 -
Viun11g00138 366 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 141 IPR001164 GO:0005096
Viun11g00138 366 SMART arf_gap_3 17 139 IPR001164 GO:0005096
Viun11g00138 366 FunFam stromal membrane-associated protein 1 isoform X1 2 137 - -
Viun11g00138 366 SUPERFAMILY ArfGap/RecO-like zinc finger 17 132 IPR037278 -
Viun11g00138 366 Gene3D C2 domain 209 366 IPR035892 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun11g00138 Viun-Chr11 1049902 1054981 Wgd