Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g00138 | ATGTCTATGCAGGATGAAAATTCTGATACAAAAGAAGTAATATGTCCCCAGAGAAGGCTAACAAATCTGATGCATCATGGTGGGAACAAGTTTTGTGCTGATTGCGGAACTCCAGAGCCAAAATGGGTATCTTCGAGTCTTGGAGTATTTATTTGCATCAAGTGTTCTGGCATACATAGAAGTCTAGGAGTCCACATATCAAAGGTTCTATCATTGAAGCTAGATGAATGGACAGATGAACAAGTTGATGCATTAGCAAAATTAGGAGGAAATACACTATTAAACAAGAAGTATGAAGCTTGCATCCCAAGTAACATGAGAAAACCAAAACCACATTCTTCCATTGAAGAGCGCTCTGAATATATTCGGAGAAAATATGAGATGCAACAGTTTATGGGGTGTGATGACAATGGGGCAGGCCCCATTGTCCCATCATCTCAAGGAAGAAGTGTATCACTTGCTCAGTGCAGCTCTTCATACTATCATTCTATTATAGACAAAAAACCATCTGAAAGATTTCCAGGCAGAAGTCGAATTGGGAATGCATTCCGAAATAGTTGGGGAAGAAAAGATTCTGAGCACAAGTCAAAGAAAAGTACATCATTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTGGTTAGAGGCACTCACCTAGCTGTTCGAGACGTGATGACTAGTGACCCTTATGTCATCCTTTCTTTGGGACACCAATCAGTAAAAACACGAGTCATAAAGAACAATTTGAATCCAGTGTGGAATGAAAGTCTAATGCTTTCAATTCCTGAGAACATTCCTCCTCTAAAAGTGCTTGTGTATGACAAGGATACATTTTCAACTGATGATTTCATGGGAGAGGCTGAAATAGACATTCAACCTCTAGTTATAGCTGCAAAGGCCTATGAGAAATCCAACATCAATGAGTCCATGCAACTTGGTAAATTTGTGGCAAGCAAGGACAACACCCTTGTTAGAGATGGTATCATATCCCTTGATGAAGGCAAGATCAAACAGGAGATCTCAGTGAGACTTCAGAACATTGAGAGAGGTGAACTTGAGCTTGAGCTTGAGTGTGTTCCTCTTACTCAATAG | 1101 | 0.3996 | MSMQDENSDTKEVICPQRRLTNLMHHGGNKFCADCGTPEPKWVSSSLGVFICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALAKLGGNTLLNKKYEACIPSNMRKPKPHSSIEERSEYIRRKYEMQQFMGCDDNGAGPIVPSSQGRSVSLAQCSSSYYHSIIDKKPSERFPGRSRIGNAFRNSWGRKDSEHKSKKSTSLAGMVEFVGLIKVNVVRGTHLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVIAAKAYEKSNINESMQLGKFVASKDNTLVRDGIISLDEGKIKQEISVRLQNIERGELELELECVPLTQ | 366 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g00138 | 366 | CDD | ArfGap | 20 | 126 | - | - | |
Viun11g00138 | 366 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD12 | 208 | 366 | - | - | |
Viun11g00138 | 366 | Pfam | Putative GTPase activating protein for Arf | 18 | 132 | IPR001164 | GO:0005096 | |
Viun11g00138 | 366 | PRINTS | HIV Rev interacting protein signature | 48 | 65 | IPR001164 | GO:0005096 | |
Viun11g00138 | 366 | PRINTS | HIV Rev interacting protein signature | 29 | 48 | IPR001164 | GO:0005096 | |
Viun11g00138 | 366 | PRINTS | HIV Rev interacting protein signature | 69 | 90 | IPR001164 | GO:0005096 | |
Viun11g00138 | 366 | Gene3D | Arf GTPase activating protein | 2 | 137 | IPR038508 | - | |
Viun11g00138 | 366 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 13 | 366 | IPR044518 | GO:0005096|GO:0005543 | |
Viun11g00138 | 366 | SMART | C2_3c | 211 | 306 | IPR000008 | - | |
Viun11g00138 | 366 | CDD | C2_ArfGAP | 209 | 353 | - | - | |
Viun11g00138 | 366 | ProSiteProfiles | C2 domain profile. | 192 | 308 | IPR000008 | - | |
Viun11g00138 | 366 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 207 | 301 | IPR035892 | - | |
Viun11g00138 | 366 | Pfam | C2 domain | 211 | 297 | IPR000008 | - | |
Viun11g00138 | 366 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 17 | 141 | IPR001164 | GO:0005096 | |
Viun11g00138 | 366 | SMART | arf_gap_3 | 17 | 139 | IPR001164 | GO:0005096 | |
Viun11g00138 | 366 | FunFam | stromal membrane-associated protein 1 isoform X1 | 2 | 137 | - | - | |
Viun11g00138 | 366 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 17 | 132 | IPR037278 | - | |
Viun11g00138 | 366 | Gene3D | C2 domain | 209 | 366 | IPR035892 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g00138 | Viun-Chr11 | 1049902 | 1054981 | Wgd |