Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00127 ATGACATCAATCTCACATTCTTCTCAGACCATTCTTTTACTGTATCTTTACTTCTTCTCTTTCTCAGAGGCTTTCAATGGTGGTTTCACTGTGGAGATCCTCCACCGTGACTCACCAAAATCACCATTCTATCGTCCCACAGAAACTCAACTCCATCGAGTTGCCAATGCTGTTCGTCGTTCCATTCATCGTGCTAATCATTTCCACCAAAATTTTGTCTCTAAAAACACTGCTGAATCCAGTGTGACACCAGATATAGGTGACTACGTGATGAGTTATTCAGTTGGAACCCCAGAAGTTAAAGTTTTTGGCATTATTGACACAGGCAGTGATCTAGTTTGGACGCAGTGTCAACCTTGTAAAACTTGTTACAACCAAACCACACCAATCTTCAACTCTTCAAAATCCACCACCTACAAAACCCTTCCTTGTTCTTCCACTTCATGCAAATCACTGTCAGATAACTCTTGCTATTCACACAAACACAAAAACTGTGAATACAGTATTTTGTACGAGGATGGAAGATACTCACATGGAGATCTTGGTTTGGAGACACTCACCTTAGGCTCCACCAATGGCTCTTCTGTCAAATTTCCCAGAACTGTGATAGGATGTGGCCGTAACAACAGTGTTTCCTCTGAAGAGAAAAGTTCTGGCATGGTTGGTTTAGGTCATGGATCTTTGTCTCTGATATCTCAGTTGAGTTCTTCAGTAGGTGGAAAATTTTCTTATTGTCTTGCACCGATATATAACAAACCTAGCAAACTCAGTTTTGGAGAAGCTGCTGTGGTTTCTGGGAATCACACTGTTTCCACCCCACTAGCCTATCATGGTCATTACTATCTGACACTGGAAGCACTCAGTGTTGGAAAAAACAGAATAGAGTTTGGAAAATCTAATGAAGAGGGAAACATCATAATTGATTCTGGGACAACACTCACTTTTTTGCCGGATGATGTTTATTCAAAGCTGGAATCAGCAGTGGCAAATGAAGTTAAGTTAAAACGTGTTAAGGATCCATTGTTGAGCCTTTGCTACAAAGGTGCACTTCATGAACTGCATGCACCAGTGATAACAGCACATTTCAGTGGCGATGCAGATGTGAAGTTAAGTGTTGACAACTCCTTCATTGATTCGGGTGATGGAGTAGTTTGCTTTGCTTTCATGGCAAGTAAAAGCTCTTCGATCTTTGGAAACTTTGCTCAGAAAAACATCTTGGTTGGCTATGATCTGCAGAAGAAAACAGTCTCCTTTAAGCCAACAGATTGTGTTCAAAAGTGA 1281 0.4091 MTSISHSSQTILLLYLYFFSFSEAFNGGFTVEILHRDSPKSPFYRPTETQLHRVANAVRRSIHRANHFHQNFVSKNTAESSVTPDIGDYVMSYSVGTPEVKVFGIIDTGSDLVWTQCQPCKTCYNQTTPIFNSSKSTTYKTLPCSSTSCKSLSDNSCYSHKHKNCEYSILYEDGRYSHGDLGLETLTLGSTNGSSVKFPRTVIGCGRNNSVSSEEKSSGMVGLGHGSLSLISQLSSSVGGKFSYCLAPIYNKPSKLSFGEAAVVSGNHTVSTPLAYHGHYYLTLEALSVGKNRIEFGKSNEEGNIIIDSGTTLTFLPDDVYSKLESAVANEVKLKRVKDPLLSLCYKGALHELHAPVITAHFSGDADVKLSVDNSFIDSGDGVVCFAFMASKSSSIFGNFAQKNILVGYDLQKKTVSFKPTDCVQK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00127 426 FunFam Probable aspartic protease At2g35615 68 259 - -
Viun11g00127 426 SUPERFAMILY Acid proteases 86 423 IPR021109 -
Viun11g00127 426 Gene3D Acid Proteases 66 258 IPR021109 -
Viun11g00127 426 PANTHER OS07G0603500 PROTEIN-RELATED 31 423 - -
Viun11g00127 426 Pfam Xylanase inhibitor C-terminal 279 419 IPR032799 -
Viun11g00127 426 FunFam Aspartic proteinase CDR1 261 426 - -
Viun11g00127 426 ProSiteProfiles Peptidase family A1 domain profile. 89 419 IPR033121 -
Viun11g00127 426 CDD pepsin_A_like_plant 89 423 IPR034161 -
Viun11g00127 426 Pfam Xylanase inhibitor N-terminal 89 259 IPR032861 -
Viun11g00127 426 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 305 316 IPR001969 GO:0004190|GO:0006508
Viun11g00127 426 Gene3D Acid Proteases 259 426 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00127 Viun-Chr11 891728 893008 Dispersed/Proximal