Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00111 ATGGTTCTATGTTACTCATTTTGTTTCCTTTTTTTGTTGTTTCTTCACAACATTTCTTTCTCAGAATCCCTTAAAAGCGGATTCAGTGTGGAGTTGATCCACCGTGATTCACCAAAATCACCCTTTTACCGTCCCACAGAAACTCATTTCCAACGAGTTCAAAATGCGGTTCTTCGTTCCATTCATCGTGCTAATTACTCTCGACTAGATCATGATGTTGAGACCACTGTAACACCAAGTACAGGAGATTTCCTGATGAAATATTCAGTCGGAACTCCACCATTCCAAATCTTTGGTGTAGTTGATACTGGTTCCAGCACCGTTTGGATGCAGTGTCAACCTTGTAAAAACTGTTACAAACAAGACAGACCCATATTCAATCCTTCCAAATCAAGCACATACACCAGAATCCCTTGTGTTGCTGCTGAATGTTTGAGCGTGACAACCACATTCTGCGATTTCAACAACGGGAAGCATTGCGCATATAAAATCGGCTATGGCGATGGATCAATTTCAAAAGGAGATTTCAGTAGGGACACCGTTACTCTAACTTCCAGCAGTGAAAATCGTCCTATACGATTGCTCAGAACTGCGATTGGATGTGGACACGACAACGTTGGAACCTTTGATCGCGAACATTCTGGCATAGTTGGCCTCGGAAGAGGACCTTTCTCACTCGCAAGTCAGTTAAGACCAGACACAGGTGGAACATTCTCGTACTGTTTCACACCGATGTTTGAAGGAGAGATAAAACCTAGCTTTCTCCATTTCGGAGATCGTGCTGAGGTTACTGTTAAAACTGCGGTTCCAACCCCTATGGTCATAAACAATGAAGCGTCCTTCAAGTACTATTTGGTGATGGAAGCGATGACTGTGGGAAGCAAGAGAATAGAGTTTCCGAGAAATGGTGGAGAGGGAAACATCTTACTTGACTCAGGGACAACACTCTCTTTTTTGCCAGATCAGGTTTACTCAGCTTTGGAAGCAGAAATGGTGAATGCAGTTAATTTGGTGCGTACTGATAGCCCAATAAAGAAATTGAAATTGTGTTACGAACTTACGTCTGGTCGGAAATATCAAATACCGACAGTGTTTGCACATTTCAAAGGTGGTGCGGTTGTGGAATTGCATTCTATCAACACATTTCTGAAGGTGAGTGAAACTAAAATATGTTTGGCTTTCGCTCCGAGGCCAAAAGCCGTCTTTGGAAATGTGGCACAACAGGACATCTTGGTTAGCTATGACACACAACATAACACAGTTACCTTCCTCAACACAGATTGTACCTCGGAATTATAG 1299 0.4257 MVLCYSFCFLFLLFLHNISFSESLKSGFSVELIHRDSPKSPFYRPTETHFQRVQNAVLRSIHRANYSRLDHDVETTVTPSTGDFLMKYSVGTPPFQIFGVVDTGSSTVWMQCQPCKNCYKQDRPIFNPSKSSTYTRIPCVAAECLSVTTTFCDFNNGKHCAYKIGYGDGSISKGDFSRDTVTLTSSSENRPIRLLRTAIGCGHDNVGTFDREHSGIVGLGRGPFSLASQLRPDTGGTFSYCFTPMFEGEIKPSFLHFGDRAEVTVKTAVPTPMVINNEASFKYYLVMEAMTVGSKRIEFPRNGGEGNILLDSGTTLSFLPDQVYSALEAEMVNAVNLVRTDSPIKKLKLCYELTSGRKYQIPTVFAHFKGGAVVELHSINTFLKVSETKICLAFAPRPKAVFGNVAQQDILVSYDTQHNTVTFLNTDCTSEL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00111 432 Pfam Xylanase inhibitor C-terminal 282 423 IPR032799 -
Viun11g00111 432 PANTHER OS07G0603500 PROTEIN-RELATED 30 429 - -
Viun11g00111 432 Pfam Xylanase inhibitor N-terminal 84 259 IPR032861 -
Viun11g00111 432 SUPERFAMILY Acid proteases 77 428 IPR021109 -
Viun11g00111 432 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 308 319 IPR001969 GO:0004190|GO:0006508
Viun11g00111 432 Gene3D Acid Proteases 63 259 IPR021109 -
Viun11g00111 432 Gene3D Acid Proteases 260 431 IPR021109 -
Viun11g00111 432 ProSiteProfiles Peptidase family A1 domain profile. 84 424 IPR033121 -
Viun11g00111 432 FunFam Probable aspartic protease At2g35615 63 258 - -
Viun11g00111 432 CDD pepsin_A_like_plant 84 428 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00111 Viun-Chr11 749552 750850 Tandem