Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00080 ATGGAAGAGAATGGTAGTTCCAATGAACCAAACAGCAACTCGAAGTGGCCTCTCTTCATTTTCTTCAAAGGTGCAAGGGATGTTTTCAAATTGGATGCACTTTCTCGGGAGTTATTAGGGATTGCTTTTCCCTCAGCACTAGCCGTTGCAGCTGATCCAATTGCTTCTCTAATTGACACAGCTTTCATTGGCCACATAGGGCCTGTGGAACTTGCTGCTGCAGGAGTTTCCATTGCTTTGTTCAACCAAGCTTCAAGAATCACCATTTTTCCTCTTGTGAGCATCACCACTTCATTTGTGGCTGAGGAAGATACTCTTGAAAAGCTCAAAGAAGTGATTGTGCCAGAGGAACACATGCTTCAACACATGGAAAAAGGTTCTCTCAAACACAGTAATAACATTTCACCAAAACCTCTGCTTCAAAATTCTGAATCAAAGGATCCAGAAGTCAAAAGTTTTGGATCCCAAGCTCTGCAAAATAATCATGCTACAAGGGACAATCACACAGAAACTGGAGATGCCAACAAAAGTATCTGCAAGTCTTCATGGATTACTAAGAGTGGAGAGAAAGATGGAAAGAAGAAGAAGAAGAGACGTATTGCTTCAGCATCAACAGCACTACTTTTTGGCACCATCCTTGGTCTTATTCAAACTGCTGTTCTTATATTTGCAGCAAAACCTCTCTTACGTGTTATGGGTGTGAAACCAGATTCTCCAATGCTAAATCCAGCAGAAAAGTACTTAAAACTGAGATCTATTGGAGCACCTGCGGTTCTTCTTTCCTTGGCCATGCAAGGAATCTTTAGAGGGTTTAAGGATACAACAACTCCATTATATGTCATTGTTTCTGGATATGCATTCAATGTCATCTTGGACCCAATTCTTATTTTCACATTGAAATTAGGCATCAAAGGAGCAGCCATCTCACATGTTTTATCTCAGTACATGATGGCAATCACTCTTTTACTGATATTAATGAAAAAAGTGCATCTCTTACCTCCAAGCATAAAGGATTTGCAGATTTTCAGATTTCTTAAAAATGGAGGTTTGTTGATGCTGAGAGTGATAGCAGTGACATTTTGTGTTACCTTGGCAGCATCATTAGCAGCAAGGCTTGGTTCAATTCCCATGGCTGCATTTCAGACATGCCTGCAAGTCTGGTTGACTTCATCTCTTCTTGCAGATGGTTTAGCTGTTGCTGTTCAGGCAATTCTAGCTTGTTCTTTTGCTGAAAAGGACTATAAGAAAACAACAGCAGCTGCAATAAGAACACTGCAAATGGCTTTTGTTTTAGGAATGGGTCTTTCTCTTACTGTTGGACTTGGATTATACTTTGGAGCTGGAATATTCTCTAGAAATATTCATGTTGTGCACTTAATTAAAATAGGCTTACCGTTTGTGGCTGCTACTCAACCAATCAATTCACTAGCCTTTGTGTTTGATGGAGTGAACTATGGAGCTTCTGATTTTGCATACGCAGCATGCTCTCTCGTGGTGGTGTCCATAGTAAGTGTAGCCATAGAGTTTGTTCTCTACAGGGCCAAACATTTCATTGGGATTTGGATTGCACTAACCATATATATGACTCTTCGCATGTTGGCTGGTGTATGGAGGATGGGAACTGGGACAGGACCATGGCACTATCTCAGAGGTTGTTCATTGACTTAA 1668 0.4077 MEENGSSNEPNSNSKWPLFIFFKGARDVFKLDALSRELLGIAFPSALAVAADPIASLIDTAFIGHIGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEEDTLEKLKEVIVPEEHMLQHMEKGSLKHSNNISPKPLLQNSESKDPEVKSFGSQALQNNHATRDNHTETGDANKSICKSSWITKSGEKDGKKKKKRRIASASTALLFGTILGLIQTAVLIFAAKPLLRVMGVKPDSPMLNPAEKYLKLRSIGAPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYAFNVILDPILIFTLKLGIKGAAISHVLSQYMMAITLLLILMKKVHLLPPSIKDLQIFRFLKNGGLLMLRVIAVTFCVTLAASLAARLGSIPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFAEKDYKKTTAAAIRTLQMAFVLGMGLSLTVGLGLYFGAGIFSRNIHVVHLIKIGLPFVAATQPINSLAFVFDGVNYGASDFAYAACSLVVVSIVSVAIEFVLYRAKHFIGIWIALTIYMTLRMLAGVWRMGTGTGPWHYLRGCSLT 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00080 555 CDD MATE_DinF_like 36 541 IPR044644 -
Viun11g00080 555 MobiDBLite consensus disorder prediction 124 175 - -
Viun11g00080 555 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 6 550 IPR044644 -
Viun11g00080 555 MobiDBLite consensus disorder prediction 126 165 - -
Viun11g00080 555 NCBIfam MATE family efflux transporter 188 521 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun11g00080 555 Pfam MatE 352 508 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun11g00080 555 Pfam MatE 192 294 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00080 Viun-Chr11 495557 503172 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03600 5 45444242 45448915 Viun11g00080 11 495557 503172 ECH
Viun11g00080 11 495557 503172 Viun11g00080 11 495557 503172 ECH