Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00059 ATGAGCATTGTGTATAGTCATGCTGTGAAGTATTCCCCAGAAGTGACAAGGATGAAGCCAGAAATGGATTCAAATATTGGTCAACACTGTCACCAACAAAATTCTGGGCTAATGAGGTACCGTTCTGCTCCAAGCTCATTGCTCACAAGTCTTGTAAACAACACCAGCAACAACAACAACATCAACATTAACAACAACATTGGTTGTGTCAATGATGAAACTTTCAGAAGTGACCATAATCATCATCATCAGCATCAGCATCATCAGCAGCAGCAGCAGAACTATCCTCCCTCTACAAGTTCTGAAATGGAGACCATGTTGGCCAAGTTGATTTCTTCCAATGATTCTGAGACTCTGCAAGAGTTTGGAGGGAAGCCGGTGAAGGAAGAAGCAGGTGACAGAGTTTCACAGCCACCACAACAACACAGTGGCTACTCTTTCGGTTCTTCACCTCAGATAATGTACCAAACTCAGCAATTTCAAGGCTTTTCTATGCCAAATGGTTCTTTGAGACCTGCAGGGAATGGTTTTGATGGCTCATTCAGTGCAGTGAATTCCATGGCTTCTCAGAATTCCACACAAACCAAAATGGTTTCTTCCACCAATTGCTCCAATCTCATTAGGCAGAAGAGTTCCCCTGCAGGGTTTTTCTCCAATTACTCAGTTGATAACACAATGAGAGATGTGGCAAGTTTTAGGGGATGTGATGTATCAAATGGACAAGCTATTACATCCACTAGTGGATTGCATGGTACTTTGAACTTCTCTTCAAGGCCATCATCCTCTTGCTCCACCAGAATGCCACAGATTGCTGAAAATGGAAATGAGGGTGTGGAACCAAATTGTGTTGAAAGCAGAAACCTGAGGAACATGCCTAGTTTCACCCCTGATTTCTGGGATGGTTCTGCCATCAGTGCCTCCAGAACAGCCAGTAACAACTGTGAAATATCATTTTCCACTTCAAATGCAATGGATATTCAGGATGAAGATTTTGGATATCAGAAACTTGGTTTGACCCATCATTTGAGTCTTCCTAGCTCTTCTACCAGAATGGCTGCTACCATGGAGAAGTTATACCAAACTCAAGGAAATGTTCCATGCAAAATTCGTGCCAAGAGAGGTTTTGCCACTCACCCAAGAAGCATTGCTGAAAGGGAAAGAAGAACAAGAATCAGTGCAAGAATCAAGAAATTGCAAGACCTTTTCCCAGACAAGCAAACAAGCACAGCTGATATGTTGGATTTGGCTGTTGAGTACATCAAAGATCTGCAGAAACAAGTTAAGATTCTGGCTGACACTAGGGCAAAGTGCACTTGTACAAGTAACCAGAAGCAATAA 1338 0.4253 MSIVYSHAVKYSPEVTRMKPEMDSNIGQHCHQQNSGLMRYRSAPSSLLTSLVNNTSNNNNININNNIGCVNDETFRSDHNHHHQHQHHQQQQQNYPPSTSSEMETMLAKLISSNDSETLQEFGGKPVKEEAGDRVSQPPQQHSGYSFGSSPQIMYQTQQFQGFSMPNGSLRPAGNGFDGSFSAVNSMASQNSTQTKMVSSTNCSNLIRQKSSPAGFFSNYSVDNTMRDVASFRGCDVSNGQAITSTSGLHGTLNFSSRPSSSCSTRMPQIAENGNEGVEPNCVESRNLRNMPSFTPDFWDGSAISASRTASNNCEISFSTSNAMDIQDEDFGYQKLGLTHHLSLPSSSTRMAATMEKLYQTQGNVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPDKQTSTADMLDLAVEYIKDLQKQVKILADTRAKCTCTSNQKQ 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00059 445 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 380 435 IPR036638 GO:0046983
Viun11g00059 445 MobiDBLite consensus disorder prediction 89 103 - -
Viun11g00059 445 Gene3D - 377 444 IPR036638 GO:0046983
Viun11g00059 445 SMART finulus 381 429 IPR011598 GO:0046983
Viun11g00059 445 CDD bHLH_AtbHLH_like 380 430 IPR045239 -
Viun11g00059 445 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 375 423 IPR011598 GO:0046983
Viun11g00059 445 MobiDBLite consensus disorder prediction 126 150 - -
Viun11g00059 445 MobiDBLite consensus disorder prediction 136 150 - -
Viun11g00059 445 MobiDBLite consensus disorder prediction 260 279 - -
Viun11g00059 445 Pfam Helix-loop-helix DNA-binding domain 381 424 IPR011598 GO:0046983
Viun11g00059 445 MobiDBLite consensus disorder prediction 72 103 - -
Viun11g00059 445 FunFam Transcription factor bHLH130 family 376 443 - -
Viun11g00059 445 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00059 Viun-Chr11 337187 341092 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Viun11g00059 HLH 2.6e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00059 11 337187 341092 Viun11g00059 11 337187 341092 ECH