Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01001 ATGGGAGGGGAGAGCAACAAGGTCTTCACTTTGTCTGAGGTTTCTCAGCACAATAATGCCAAAGATTGTTGGCTTGTTATTCATGGCAAGGTTTATAATGTGACAAAGTTCTTGGAGGACCACCCTGGTGGTGATGATGTCCTCTTGTCTTCCACAGGGAAGGATGCAAGTAATGATTTTGATGATATTGGTCACAGCACCAGTGCCGTAGCCATGATGGATGAGTTCTATGTTGGAGACATTGATTCATCATCCATCCCCAGCAAGGTCGCGTACACTCCTCCCAACCAACCTAAGTATAACCAGGATAAGACACCAGAGTTCATCATCAGGATCCTCCAGTTTCTAGTTCCCTTGTTTATCTTGGGTTTGGCAGCTGGTATTCATTTCTACACCAAATCAAAATAA 408 0.4412 MGGESNKVFTLSEVSQHNNAKDCWLVIHGKVYNVTKFLEDHPGGDDVLLSSTGKDASNDFDDIGHSTSAVAMMDEFYVGDIDSSSIPSKVAYTPPNQPKYNQDKTPEFIIRILQFLVPLFILGLAAGIHFYTKSK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01001 135 FunFam Cytochrome b5 type B 3 86 - -
Viun10g01001 135 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Viun10g01001 135 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Viun10g01001 135 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Viun10g01001 135 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Viun10g01001 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 6 82 IPR001199 -
Viun10g01001 135 Gene3D - 3 86 IPR036400 -
Viun10g01001 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037
Viun10g01001 135 SMART Cyt_b5_2 9 82 IPR001199 -
Viun10g01001 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 81 IPR001199 -
Viun10g01001 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 89 IPR036400 -
Viun10g01001 135 PANTHER CYTOCHROME B5 4 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01001 Viun-Chr10 15673716 15676324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01001 1 135 NADPH P450 reductases AT5G48810 64.964 2.06e-66 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01001 K23490 - gmx:100500611 256.144