Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9267g00005 ATGATGGGTCTGTTGACGAATCTTCGAGGCTCGAGAACAGATGGTGCCCAACAAGATAGCTTACCCGTTTTGGCTCCGGGTGGCAACCCAAAGAAGAAATGGAGCAATCTAATGCCTCTTGTTGTTGCCCTTGTGGTCATCGCGGAGATCGCGTTTCTGGGTAGGTTGGATATGGCCAAAAACGCCGCCATGGTTGACTCCCTCGCTGACTTCTTCTACCGCTCTCGAGCGGTTGTTGAAGGTGATGATTTGGGGTTGGGTTCGGTGGCTTCTGATCGGAATTCTGAATCGGATAGTTGTGAGGAATGGTTGGAGAGGGAGGATGCTGTCACGTATTCGAGGGACTTTTCTAAAGAGCCTGTTTTTGTTTCTGGAGCTGACCAGGAGTGGAAGTCGTGTTCGGTTGGATGTAAATTTGGGTTTAGTGGGGATAAGAAGCCAGATGCCGCATTTGGGTTACCTCAACCAAGTGGAACAGCTAGCGTTCTGCGATCAATGGAATCAGCAGAATACTATGCTGAGAACAATATTGCCATGGCAAGACGAAGGGGATATAACATTGTAATGACAACCAGTCTATCTTCGGATGTTCCTGTTGGATATTTTTCATGGGCTGAGTATGATATGATGGCCCCAGTGCAGCCGAAAACTGAAGCTGCTCTTGCAGCTGCTTTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAGGCCCTTGAAAAATCAAACATCAAGATTGATTCTTATGGTGGTTGTCACAGGAACCGTGATGGAAGAGTGAACAAAGTGGAAGCCCTGAAGCACTACAAATTTAGCTTAGCGTTTGAAAATTCGAATGAGGAAGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGTATGGATATGTATATATTGTATCTCTGTTCTCTTGCCTTTCTATATATACAAAACATTTATTAA 957 0.4504 MMGLLTNLRGSRTDGAQQDSLPVLAPGGNPKKKWSNLMPLVVALVVIAEIAFLGRLDMAKNAAMVDSLADFFYRSRAVVEGDDLGLGSVASDRNSESDSCEEWLEREDAVTYSRDFSKEPVFVSGADQEWKSCSVGCKFGFSGDKKPDAAFGLPQPSGTASVLRSMESAEYYAENNIAMARRRGYNIVMTTSLSSDVPVGYFSWAEYDMMAPVQPKTEAALAAAFISNCGARNFRLQALEALEKSNIKIDSYGGCHRNRDGRVNKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGMDMYILYLCSLAFLYIQNIY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9267g00005 318 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 44 298 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vium9267g00005 318 Gene3D - 164 301 IPR038577 -
Vium9267g00005 318 MobiDBLite consensus disorder prediction 1 27 - -
Vium9267g00005 318 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 297 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vium9267g00005 318 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9267g00005 Vium-Chr9267 53446 58989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9267g00005 2 298 Xyloglucan Fucosyltransferase1 AT3G19280 65.902 4.70e-140 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9267g00005 K00753 - gmx:100792811 523.472