Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9267g00002 ATGATGGGTCTGTTGACGAATCTTCGAGGCTCGAGAACAGATGGTGCCCAACAAGATAGCTTACCCGTTTTGGCTCCGGGTGGCAACCCAAAGAAGAAATGGAGCAATCTAATGCCTCTTGTTGTTGCCCTTGTGGTCATCGCGGAGATCGCGTTTCTGGGTAGGTTGGATATGGCCAAAAACGCCGCCATGGTTGACTCCCTCGCTGACTTCTTCTACCGCTCTCGAGCGGTTGTTGAAGGTGATGATTTGGGGTTGGGTTCGGTGGCTTCTGATCGGAATTCTGAATCGGATAGTTGTGAGGAATGGTTGGAGAGGGAGGATGCTGTCACGTATTCGAGGGACTTTTCTAAAGAGCCTGTTTTTGTTTCTGGAGCTGACCAGGAGTGGAAGTCGTGTTCGGTTGGATGTAAATTTGGGTTTAGTGGGGATAAGAAGCCAGATGCCGCATTTGGGTTACCTCAACCAAGTGGAACAGCTAGCGTTCTGCGATCAATGGAATCAGCAGAATACTATGCTGAGAACAATATTGCCATGGCAAGACGAAGGGGATATAACATTGTAATGACAACCAGTCTATCTTCGGATGTTCCTGTTGGATATTTTTCATGGGCTGAGTATGATATGATGGCCCCAGTGCAGCCGAAAACTGAAGCTGCTCTTGCAGCTGCTTTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAGGCCCTTGAAAAATCAAACATCAAGATTGATTCTTATGGTGGTTGTCACAGGAACCGTGATGGAAGAGTGAACAAAGTGGAAGCCCTGAAGCACTACAAATTTAGCTTAGCGTTTGAAAATTCGAATGAGGAAGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCAGGACTTTGCTCCTTCTCCTGGTTCAATTTTACATATTAAAGAGATAGAGGATGTTGAGTCTGTTGCAAAGACCATGAGATATCTAGCAGAAAATCCCGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTGCATTCATCGTGCCGCCTTTGCATTCACTTGGCCACAGTGAGTAGAGAGAAGGAAGAAAATAATCCAAGCTTTAAGAGACGTCCTTGCAAGTGCACTAGAGGGCCAGAAACTGTATATCATATCTATGTCAGAGAAAGGGGAAGGTTTGAGATGGAGTCCGTTTACCTGAGGTCTAGCAATTTAACTCTGAATGCTGTGAAGGCTGCTGTTGTTTTGAAGTTCACATCCCTGAATCTTGTGCCTGTATGGAAGACTGAAAGGCCTGAAGTTATAAGAGGGGGGAGTGATTTAAAACTCTACAAAATATACCCAGTTGGCTTGACACAGAGACAAGCTCTTTATACCTTCAGCTTCAAAGGTGATGCTGATTTCAGGAGTCACTTAGAGAACAATCCTTGTGCCAAGTTTGAAGTCATTTTTGTGTAG 1533 0.4501 MMGLLTNLRGSRTDGAQQDSLPVLAPGGNPKKKWSNLMPLVVALVVIAEIAFLGRLDMAKNAAMVDSLADFFYRSRAVVEGDDLGLGSVASDRNSESDSCEEWLEREDAVTYSRDFSKEPVFVSGADQEWKSCSVGCKFGFSGDKKPDAAFGLPQPSGTASVLRSMESAEYYAENNIAMARRRGYNIVMTTSLSSDVPVGYFSWAEYDMMAPVQPKTEAALAAAFISNCGARNFRLQALEALEKSNIKIDSYGGCHRNRDGRVNKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQDFAPSPGSILHIKEIEDVESVAKTMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKEENNPSFKRRPCKCTRGPETVYHIYVRERGRFEMESVYLRSSNLTLNAVKAAVVLKFTSLNLVPVWKTERPEVIRGGSDLKLYKIYPVGLTQRQALYTFSFKGDADFRSHLENNPCAKFEVIFV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9267g00002 510 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 167 359 - -
Vium9267g00002 510 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 384 - -
Vium9267g00002 510 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 44 459 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vium9267g00002 510 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 386 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vium9267g00002 510 Gene3D - 164 359 IPR038577 -
Vium9267g00002 510 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9267g00002 Vium-Chr9267 44627 51669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9267g00002 2 510 Xyloglucan Fucosyltransferase1 AT3G19280 66.344 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9267g00002 K00753 - gmx:100792811 912.909