Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium690g00006 ATGCCGTCGTTTGAGCAGCAACTGAGTGATCTTTTTCCGAACAAGGAAACAATTTTTCATTTCTTGGGTCGATATCTTTTCCACCCCTCCAACAAAGTTTGGGGACTTGTTAGTAGATACTATCAAGCTTATTTAGCTAATGCTGATGAAAAATTAGGCATCCAGATAAGAGTGTTTGAAACTGGAACTGGTCCATTTCAACATGTGTTGGATCAGATCTTAGCTTGCACCTTGAAGGAGAATCTTTTGCCTGATGTTAATCGAAAGGGTGATTTTGTTAACTCATCAGGAAAGCCGAAGTCAAAAGCTGTACTGATGACATCGTTGAGCTCTGGTTATTTTGAGAAAGTGAGAGACATGTATTGGGAACATCCTACTGCGACAGGAGAAATTATTGGCATTTACCAGCCAAGCCATGAAGGTTATCAACAAACAGAGAAGAAGAGGCACAACCAAAAAGCTTGGGCAGAAATATACTTATTGAGCTTGACCGACGCGTTGGTCACGAGCTCGTGGTCTACTTTCGGCTATGTGGCACAGGGGCTTGGAGGTTTGAAACCATGGATACTGTACAAGCCAGAGAATGGAACAGCCCCTGATCCTGCTTGTCAACGTGCCATGTCAATGGAGCCATGCTTCCATGCTCCTCCCTTCTATGATTGTAAGGCTAAGAGAGGAACTGATACTGGTGCACTTGTTCCACATGTACGGCACTGTGAGGATATGAGCTGGGGTCTTAAGCTTGTAGACAGCTTTAGTTCGCAATAA 768 0.4375 MPSFEQQLSDLFPNKETIFHFLGRYLFHPSNKVWGLVSRYYQAYLANADEKLGIQIRVFETGTGPFQHVLDQILACTLKENLLPDVNRKGDFVNSSGKPKSKAVLMTSLSSGYFEKVRDMYWEHPTATGEIIGIYQPSHEGYQQTEKKRHNQKAWAEIYLLSLTDALVTSSWSTFGYVAQGLGGLKPWILYKPENGTAPDPACQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDSFSSQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium690g00006 255 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 250 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vium690g00006 255 FunFam Galactoside 2-alpha-L-fucosyltransferase 35 189 - -
Vium690g00006 255 Pfam Xyloglucan fucosyltransferase 2 222 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium690g00006 Vium-Chr690 37819 40651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium690g00006 1 249 Xyloglucan Fucosyltransferase1 AT2G03220 71.486 1.64e-136 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium690g00006 K13681 - vum:124820600 537.724