Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6436g00029 ATGTTTGATATCCCCAAAGATTATAATGTATTGATTGAAAGAATTCAGGATACAACTACTAATATACAAAAGACTCGGAATACTATTACAATCCGAGACGGGGAAGAAAAGAATTCCTATATTAGTGAGCCGGTTGCAGATAAATATTTAGAGAATAATGCATTTAAAGATACAAAGAATAATTTATCTCTATCTACTACTATTGTTAATGACAAACTACTCAATGGACTTCTAAGTTCCTCATTTGAAGAAGCATCGTGCATTAGTAGATTTCAGTCTTATTTGTATCAGAAAGTTTCTCCTTACAAACCTTCTAAATATTTGATATCCAAGTTACGAAACTATGAACATCTTCATCAAAGTTGTGGACCTTATACTACATCCTACAATGAAACTATAAAAGAGGGTGCAAAAGTTAGCAAAAATGGTGTTGATTCAAAATGCAAATATTTTATATGGACAGTTGAAGATGGCTTAGGAAACAGAATGATATCCATGGTTTCAGCATTTCTTTATGCAATCCTTACAGATCGTGTTCTTCTTGTTAGATTTGGTGATGATATGTTGAATCTCTTTTGCGAGCCATTTCCTAATTCTTCATGGTTATTGCCCAAGAATTCTCCTTATTGGAATGATCTGAAACAATTTGAAACACACAAAATCATCTTTATTGATAACAAGGAAAACAATTCACGAGAGCTTTTGCAACCAGCTCTTGTTATTAATTTAAGACACACCCATGCTGGCCCTACTAATCGGTTTCATTGTGATAAAAATCAGCATCATTTACAAAAGATTCCTGTACTCATTCTACAGTCAAATGAATATTTTGTCCCTACTCTTTATATGGTGTCCTCATTTAGAGAAGACTTCGACAAAATGTTTCCTGACAAAGACACTATTTTTCATCATCTTGGACGCTACCTTTTTCAACCATCAAATGTTGCATGGGAACGAATTCGAAATTTATATGAGGAACACTTGGCTAAGGAAAATGAAAGGATTGGCTTGCAGATTAGAGTATTTAATACTCGTCAAGCACCACCACAAACCGTTATCGATGAAATTATATCTTGCACCCATCAAAATAAGTTGCTGCCAAAATTCAACATGCATAACTTAAGGACTCTTCCTTTGAAAGATAATACCTCAAAAGTTGTTCTAGTTGTATCTTTATACTCAAAATATGGTGAAGGGTTAAAGAGTCTATATCAAAATAATACAACTTTGAGTAGAGAAGTAATAAAAGTATATCAGCCAAGTCATGAAGAGCATCAGAATTCACGTAATAGCATGCACAACATTAAGGCATGGACTGACATATATTTGTTGAGTTTGTGCAATTCATTGGTTACAAGCACCTTTTCCACTTTTGGGTACGTTGCCAGTAGTCTTGCAGGTTTGAAGCCACTGATTTTGAAAAATGTATATGGTAAAAAAGTTCCGAATCCACCTTGTGAACAAGTCAAGTTTGCGAACGAGTTCGGACTTTGCGAGTTGACCCAGTTCAGGCGCGGTTCAGTGGAGAGGAATCGGATCTTCGGTTCTGGATTCAGATCTCGAGGCTTTGCTGGCGGCGCCGAAGAAGGAAGCGGAAATGAGACGGTGGATTATGCTTTTTATTTAGGTGTTTCGCAATTGGGGTTACGAAGAGGGCAACGCCTGAAGCAAAACGGAGCTGCAACACATTACGGAAAGAACGTTAGTCTCACTGAGAGAGAATATCTTCCGCCAACCCAAACGCTGCGTTTTGTTGCTGGAAAGCCTCATAGGATGGCTAATGTAGAGAAGAGTTTCCAGAGTTTCAGAACGTTGATAGTTGTAGCTTCTATAACTTTTCCCATTTTGATAATATTTTATCTCACACACCAAAATCCAATCTTTGATATCTTTCAAGGAATCCAGAATAATACTACTAATATTTGCGACTCAGTTGCAAGTGCAAAGAATAATACATTTGAAGATGAGAAGAATGATGAGAAGTTGTTTGGTGGACTTTTAGTTTCCTCGTTTAATGAATCATCATGTGTTAGTAGGTTTCGATCTTATTTGTATCGGAAAGCTTCTCCTTTCAAACCATCTGAATATTTGATATACAAGCTACGAAACTATGAAAATCTTCATCGAAATTGTGGACCGTATACTAAGTCCTACAATGAAACCATGAAAGATGGTGCAAACTTTAGCAAAAGTGGTGTTGATTCGAAGTGCAAATATCTTGTATGGACAGCTATAGAAGGCTTGGGGAACAGGATGATATCCTTGGTTTCGACATTTCTTTATGCAATCTTCACAGATCGTGTTCTTCTTGTTAGATTTGACAATGACATGATGGATCTCTTTTGCGAGCCATTTCCGGATTCATCATGGTTGTTGCCCAAGAATTCTACTTATTGGAATGATTTGAGACAATTTAAAACATGGGATAGCATGTTTGTGAATAACAAGGGAAACGATCCACAGACAACTCTTTTTCTTGATTTGATGAACAACAATGTTCGTGTTACTAACCGTTTTCATTGTGATCAAAACCAGGTTCTTCTACAAAATATTCCCATTTTGATTTTACGATCAAATGAGTACTTTGCCCCTTCTCTTTATTTGACATACTCGTTTAGGCAAGACTTCAACAAAATGTTTCCTGACAAAGACACTACTTTTCACCTTCTAGGACGCTACCTTTTCCACCCATCAAATGTAGTGTGGGAACATATTCAGAATGTATATGAGGCACACCTAGCCAAGGAAAATGAAAGAATTGGCTTGCAGATTAGGATATATAATACCCGTCAAACCCCAGAAGAAACCATTATCAATGAAACTATATCTTGCCTCCAGCAAAATATGTTGTTGCCAAAATTCAACATGCAAAACTCATCGAGTCCTCCTTTGGAAAAGAATACCTCAAAAGTTGTTTTAGTGGTATCTTTATACTCAAAATATGGTGAGAGACTAAAGAGTATATATGAAAGTAATACAAGTTTAAGTCAGGAAGTAATAAAAGTGTATCAACCAAGTCATGAAGAGCATCAAAATTCAGGTGATAACATGCACAACATAAAGGCATGGAGTGAAATATACTTGTTGGGTTTGTGTGATGCATTGGTTACAAGCCCTACATCCACTTTTGGGTATGTTGCTCATAGTCTTGGAGGAATGAAACCATTGGTTTTGCAAAGTATATCTGGGAAAAGTATCCCAAAAGTACCTTGTCAACGACTCAAGTATATGGAACCTTGTTTCCATGATCCTCCTAATTATGACTGTATGGCCAATGCCACAGTCGATTTTACTTCTATTTTTCATAATCTTAAACGTTGTGAAGATCAATCAAGGGGAATGAAAATAATTAATACTTAA 3360 0.3616 MFDIPKDYNVLIERIQDTTTNIQKTRNTITIRDGEEKNSYISEPVADKYLENNAFKDTKNNLSLSTTIVNDKLLNGLLSSSFEEASCISRFQSYLYQKVSPYKPSKYLISKLRNYEHLHQSCGPYTTSYNETIKEGAKVSKNGVDSKCKYFIWTVEDGLGNRMISMVSAFLYAILTDRVLLVRFGDDMLNLFCEPFPNSSWLLPKNSPYWNDLKQFETHKIIFIDNKENNSRELLQPALVINLRHTHAGPTNRFHCDKNQHHLQKIPVLILQSNEYFVPTLYMVSSFREDFDKMFPDKDTIFHHLGRYLFQPSNVAWERIRNLYEEHLAKENERIGLQIRVFNTRQAPPQTVIDEIISCTHQNKLLPKFNMHNLRTLPLKDNTSKVVLVVSLYSKYGEGLKSLYQNNTTLSREVIKVYQPSHEEHQNSRNSMHNIKAWTDIYLLSLCNSLVTSTFSTFGYVASSLAGLKPLILKNVYGKKVPNPPCEQVKFANEFGLCELTQFRRGSVERNRIFGSGFRSRGFAGGAEEGSGNETVDYAFYLGVSQLGLRRGQRLKQNGAATHYGKNVSLTEREYLPPTQTLRFVAGKPHRMANVEKSFQSFRTLIVVASITFPILIIFYLTHQNPIFDIFQGIQNNTTNICDSVASAKNNTFEDEKNDEKLFGGLLVSSFNESSCVSRFRSYLYRKASPFKPSEYLIYKLRNYENLHRNCGPYTKSYNETMKDGANFSKSGVDSKCKYLVWTAIEGLGNRMISLVSTFLYAIFTDRVLLVRFDNDMMDLFCEPFPDSSWLLPKNSTYWNDLRQFKTWDSMFVNNKGNDPQTTLFLDLMNNNVRVTNRFHCDQNQVLLQNIPILILRSNEYFAPSLYLTYSFRQDFNKMFPDKDTTFHLLGRYLFHPSNVVWEHIQNVYEAHLAKENERIGLQIRIYNTRQTPEETIINETISCLQQNMLLPKFNMQNSSSPPLEKNTSKVVLVVSLYSKYGERLKSIYESNTSLSQEVIKVYQPSHEEHQNSGDNMHNIKAWSEIYLLGLCDALVTSPTSTFGYVAHSLGGMKPLVLQSISGKSIPKVPCQRLKYMEPCFHDPPNYDCMANATVDFTSIFHNLKRCEDQSRGMKIINT 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6436g00029 1119 PANTHER FUCOSYLTRANSFERASE 2-RELATED 611 1118 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vium6436g00029 1119 FunFam Galactoside 2-alpha-L-fucosyltransferase 735 786 - -
Vium6436g00029 1119 Gene3D - 145 205 - -
Vium6436g00029 1119 Gene3D - 734 787 - -
Vium6436g00029 1119 FunFam Galactoside 2-alpha-L-fucosyltransferase 146 197 - -
Vium6436g00029 1119 Pfam Xyloglucan fucosyltransferase 655 1089 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vium6436g00029 1119 Pfam Xyloglucan fucosyltransferase 68 489 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vium6436g00029 1119 Gene3D - 317 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6436g00029 Vium-Chr6436 157819 172065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6436g00029 73 486 Xyloglucan Fucosyltransferase1 AT2G03210 45.261 3.29e-117 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6436g00029 K13681 - gmx:100814715 668.692