Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5953g00003 ATGAAGAAGAAGGCACTGATTCGTGCACAAGACACAGTGCTGAAGAACATGGTGAAGATGATGGAGATTTGTGGTGTTCGTGGCTTCGTTTATGGCATCATTCCTGAGAAGGGAAAACCAGTCAGTGGAGCTTCTGATAACCTCAGAGGTTGGTGGAAGGATAGGGTCAAGTTTGATCACAATGGTCCTGCTGCTATGCTCAGGTACGAGGAAGAAACAGGGTTTGAAGACATGGTTAGTGATGGATTCAATGGACAGCCATTAACAGCATACAGTTTAAATGATCTCCCAGACACAACTCTAGGCTCACTCTTGTCATGTCTCATGCAGAACTGTGATCCTCCCCGGAGAAGGTACCCTTTGGACAAGGGCATTGCCCCTCCTTGGTGGCCCACTGGGCAGGAATGGTGGTGGGCCCAGATGGGCTTTACCATAGATCCAGGCCCACCACCCTACAAGAAGCCCCATGACCTGAAGAAGGTGTGGAAGATGTGTGTGCTCACTGCAGTCATCAAGCACATATCCCCAGACATAGCAAAGATCAGAAACATTGTTCGTCATTCTAGGACCCTTCAGGACAAGCTCAATGCAAGAGAATCTGCCATTTGGAGTGCTATTGTGAAGCGTGAAGAGTACTTTGCTAGGAGATCATACCCTAATTTCTTCCAAACCCTCCCTCCAAGAGCAGGACCTAGTGTCCCTTATGATAATAATGTTACAAATTTTATTAGGGGGCAACAAAGTAATAGCCTTGGTGGTACATTGAATCTTCTTGGGGGGCTGAATAACACACCACAACACCACAATGTTGCTAACGGTCGTGCTTGGAGCTTTCTCGATGGCCACAATAACCCTTCAACTTCCACCAGTGCTGCTACAATTCTTCTTGGGAACCCTCCACCAACCACCGATTTGATCACTGATGATGGTGCTACCAGTTTTCATGGAGTGCAGATTGATACAGCACCAGCCACAAATGGTGGAGCTAGAAATTTCTTTGTGGGGCAGTTCGATCCACCAACACCAACCAAGCAATTTGGTTCATAG 1047 0.4728 MKKKALIRAQDTVLKNMVKMMEICGVRGFVYGIIPEKGKPVSGASDNLRGWWKDRVKFDHNGPAAMLRYEEETGFEDMVSDGFNGQPLTAYSLNDLPDTTLGSLLSCLMQNCDPPRRRYPLDKGIAPPWWPTGQEWWWAQMGFTIDPGPPPYKKPHDLKKVWKMCVLTAVIKHISPDIAKIRNIVRHSRTLQDKLNARESAIWSAIVKREEYFARRSYPNFFQTLPPRAGPSVPYDNNVTNFIRGQQSNSLGGTLNLLGGLNNTPQHHNVANGRAWSFLDGHNNPSTSTSAATILLGNPPPTTDLITDDGATSFHGVQIDTAPATNGGARNFFVGQFDPPTPTKQFGS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5953g00003 348 Pfam Ethylene insensitive 3 2 211 IPR047091 GO:0003700
Vium5953g00003 348 Gene3D - 1 71 IPR023278 GO:0003700|GO:0005634
Vium5953g00003 348 Gene3D - 88 221 IPR023278 GO:0003700|GO:0005634
Vium5953g00003 348 FunFam Ethylene insensitive 3-like 1 85 221 - -
Vium5953g00003 348 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 227 IPR006957 GO:0003700|GO:0005634
Vium5953g00003 348 SUPERFAMILY DNA-binding domain of EIN3-like 91 214 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5953g00003 Vium-Chr5953 29876 31061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5953g00003 2 227 EIL Transcription Factor Family AT2G27050 61.062 5.73e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vium5953g00003 EIN3 1.5e-97 No_clan