LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium4826g00008	ATGATGATGATGTTTGAGGAGATGGGGTTTTGTAATGATTTGGACACGATGTCTACTGTCCTTGGGGACGAGGATATCACCGCCCGGCAAACTGATCCAGAGGCGATAGTTGAGGATGATTTCAGTGATGAAGAAATCGGGGTAGATGAGCTTGAAAGGAGGATGTGGAAGGACAAAATGCGTCTCAAGCGATTGAAGGAGCAGAGTAAATCTAAGGAAGGAATTGATGCGGTGAAGCAAAGACAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCCAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGGAAACCAGTGACAGGAGCATCGGATAATCTTCGTGAATGGTGGAAGGATAAAGTCAGATTCGATCGAAATGGTCCAGCTGCCATAGTCAAATACCAAGCTGATCATTCTATACCTGGAAGGAATGATGGATGCAATTCAATTGGTCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCTCCCCAGAGGAGGTTTCCATTGGAGAAGGGTATTCCTCCACCATGGTGGCCTACAGGAAATGAAGAGTGGTGGCCCCAGATTGGTTTGCCTAAAGATCACAGTCCCCCTCCTTACAAGAAGCCCCATGACCTAAAGAAGGCATGGAAAGTTGGCGTTTTGACGGCAGTTATCAAGCATATGTCCCCAGATATTGCCAAAATTCGGAAGCTTGTGAGGCAGTCCAAGTGCCTCCAAGATAAGATGACAGCGAAGGAAAGTGCAACCTGGCTTGCAATCATCAATCAGGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGACTATGTCCCTCCATTAGCCTCAGGTGGAGGGAGTGGATCTTTGGTGGTCAATGATGGCAATGAATATGATGTTGAAGGGGGTGAGGATGAGCCTAACTTTGATGTGGAAGAGAGGAAACATGAGAATATTCACATGTCCAATCTGGGGATGGAGAGAATGAGGGGAACTATGGGTGTTCAGCAGCCCTCTTTTTCTATCAAGGGAGAGGCAGTTACAAATTTGGATCTTCTTAGGAAGAGGAAGGTCTCTAATGACTTTAACATGATGGATTTGAAGATTTACACATGTGAACAGCCTCAGTGCCCTTACAGTCAAGTTCAGCTTGGTTTCCCTGATAGAATCTCTAGAGACAATCATAGGTTAATTTGTGCATTCAGAGGTCCTTCAGATTTTGGGGGTCCAAACTTTCATGTTAATGAGGTAAAGCCAGTGATATACCCCCAGTCCTTTGTTCCACCCAAGTCTACTGCTCAGTCTGCTAACGTGGTCCCGCCTGTAATTGATCTTACTGGGCTTGAAGTTTCAGAAGATGGTCAGAAAATGATCAGTGACCTTATGGCTAACTATGAAACAAATGTTCAAGGCAACAAAAACATAAGTTCATGTAATCGCATGGCTGCAGAGAATCCCTGCCTTCGACAGCATGGAATCACTATGGAAGGAAACATCTTTGATGAGCCCAACATGTCCAATAATCATCACGTATTTTCTAGAGAAGAAGGCCAATATGAGCGGTTCAAAGCTTTGAATAATGCTCCCTTCGAGACCAATCACAACAACCATAACTTCAATTCAATGTTTGGGTCCTTTTGTGATTTAGCATCATTTGATTTCAAGGAGGACATGCAAGGAGTAGGGATGGATGATGCTCTTCAGAAACAGCCAGACTTTTCCATATGGTATCAGTGA	1824	0.4496	MMMMFEEMGFCNDLDTMSTVLGDEDITARQTDPEAIVEDDFSDEEIGVDELERRMWKDKMRLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIVKYQADHSIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEEWWPQIGLPKDHSPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYVPPLASGGGSGSLVVNDGNEYDVEGGEDEPNFDVEERKHENIHMSNLGMERMRGTMGVQQPSFSIKGEAVTNLDLLRKRKVSNDFNMMDLKIYTCEQPQCPYSQVQLGFPDRISRDNHRLICAFRGPSDFGGPNFHVNEVKPVIYPQSFVPPKSTAQSANVVPPVIDLTGLEVSEDGQKMISDLMANYETNVQGNKNISSCNRMAAENPCLRQHGITMEGNIFDEPNMSNNHHVFSREEGQYERFKALNNAPFETNHNNHNFNSMFGSFCDLASFDFKEDMQGVGMDDALQKQPDFSIWYQ	607

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium4826g00008	607	SUPERFAMILY	DNA-binding domain of EIN3-like	175	299	IPR023278	GO:0003700\|GO:0005634
	Vium4826g00008	607	FunFam	Ethylene insensitive 3-like 1	81	159	-	-
	Vium4826g00008	607	Pfam	Ethylene insensitive 3	49	296	IPR047091	GO:0003700
	Vium4826g00008	607	FunFam	Ethylene insensitive 3-like 1	169	306	-	-
	Vium4826g00008	607	Gene3D	-	173	306	IPR023278	GO:0003700\|GO:0005634
	Vium4826g00008	607	Gene3D	-	81	161	IPR023278	GO:0003700\|GO:0005634
	Vium4826g00008	607	PANTHER	ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN	18	582	IPR006957	GO:0003700\|GO:0005634
	Vium4826g00008	607	Coils	Coil	48	68	-	-
	Vium4826g00008	607	MobiDBLite	consensus disorder prediction	66	91	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium4826g00008	Vium-Chr4826	54927	57581	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium4826g00008	3	606	EIL Transcription Factor Family	AT3G20770	58.540	0.0	682

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	EIL	Vium4826g00008		EIN3	2.2e-130	No_clan