Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium164g00009 ATGAAGAAGTTTTCACTCTCACACTCCGATTTGGACTCTAAATGTGCCGTCACTTTCTCACTCATGCGTTTGATGGCTTTTTTCGTCGCTGCTTTCGTCCTCTGCTCTGTTATTTTCTCTGTCTCCATTGTTCTTCGAGATCCTCCCTCAGATGCCGTCCTTCGCGAACCCTCGTCACTCACCCCTCTCTTTCAAATCACTCAAGATTTGGACAATGATACCTCTGATTCTGTTGAGTTGCTTCGAGATAAACTTCTCGGTGGCCTTCTAGTTGATGGATTTCATGAAAATTCCTGTCTCAGCAGATACCAATCAGCCGAATATCATATCAAAGGGCTGTCAGGAAAGCCTTCTTCTTACTTCATTTCTAGGTTAAGAAAATATGAAGCTCAACACAAACAGTGTGGACCTTACACTGAATACTATAACAATACAGTGGAACAACTTAGGTCTGGTAAATTTACAGAGTCCTCACCTTGTAAATATGTTGTGTGGATTGCATTTAGTGGGTTAGGGAATAGGATATTGACCCTAGCTTCTGCATTTCTCTATGCTCTTCTCACAAACCGTGTTCTGCTGGTTGACCCTGGAGTGGATATGGTTGATCTTTTTTGTGAGCCATTTCCAGATGCTTCCTGGTTTCTCCCTGCTGATTTTCCTCTTACCGCTCAGTTTAATAATTTCAGTCAGAATTCTGATCAATGTCATGGGAAAATGTTGAAAAATAAATCGGTTCTAAATTCCAATGTTCCTTCTTTTGTCTACCTTCACATAGTCCATGATTATGATGATCATGATAAGCTTTTCTTTTGTGATGAAGAGCAACATTTTCTCCAGGAAGTGCCTTGGTTAATGATGAAAACGGATAATTACTTTGTCCCGTCTCTATTCTTGATGCCATCATTTGAGCAGGAGCTGAATGATCTCTTCCCAAATAAGGAAACAGTTTTCCATTTCTTGGGTAGGTATCTGTTCCACCCCACTAACAGTGTGTGGGGACTTGTTACCAGATACTATCAAGCTTATTTAGCAAAAGTTGATGAAAGAGTGGGGATACAAATTAGAGTGTTTGACACAGAACCTGGCCCATTTGAATATGTTTTGGATCAGATCTTAGCTTGTACTTTGAAGCATAAACTTTTGCCTGATGTTAACCATCAGCAGGATGCTACCAATTCATCAGGAAGTCCCAAGTCAAAAGCGGTGTTGATGACATCCTTAAGCCCTGGTTATTTTGAAAAGGTAAGAGACATGTATTGGGAATATCCTACAGTGACAGGAGAAGTGGTTGGTGTTTACCAGCCGAGCCATGAAGGATATCAACAAACAGAGAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGCTTTGGTTACTAGCTCTTGGTCTACTTTTGGCTATGTGGCTCAGGGGCTTGGAGGTTTAAAACCATGGATTCTGTACAAACCTGAGAATCGAACAGCCCCAGATCCTCCCTGTCGGCGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGATTGCCAGGCCAAGAGAGGAACTGACACAGGTGAGCTTGTTCCATATGTGAGGCACTGTGAGGATATGAGCTGGGGCCTTAAGCTTGTAGACAGTGATACTTATCGCTAG 1662 0.4224 MKKFSLSHSDLDSKCAVTFSLMRLMAFFVAAFVLCSVIFSVSIVLRDPPSDAVLREPSSLTPLFQITQDLDNDTSDSVELLRDKLLGGLLVDGFHENSCLSRYQSAEYHIKGLSGKPSSYFISRLRKYEAQHKQCGPYTEYYNNTVEQLRSGKFTESSPCKYVVWIAFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPFPDASWFLPADFPLTAQFNNFSQNSDQCHGKMLKNKSVLNSNVPSFVYLHIVHDYDDHDKLFFCDEEQHFLQEVPWLMMKTDNYFVPSLFLMPSFEQELNDLFPNKETVFHFLGRYLFHPTNSVWGLVTRYYQAYLAKVDERVGIQIRVFDTEPGPFEYVLDQILACTLKHKLLPDVNHQQDATNSSGSPKSKAVLMTSLSPGYFEKVRDMYWEYPTVTGEVVGVYQPSHEGYQQTEKQMHNQKAWAEMYLLSLTDALVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCQAKRGTDTGELVPYVRHCEDMSWGLKLVDSDTYR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium164g00009 553 PANTHER FUCOSYLTRANSFERASE 2-RELATED 26 548 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vium164g00009 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 333 487 - -
Vium164g00009 553 Pfam Xyloglucan fucosyltransferase 66 520 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vium164g00009 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 158 209 - -
Vium164g00009 553 Gene3D - 157 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium164g00009 Vium-Chr164 47035 49055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium164g00009 5 547 Xyloglucan Fucosyltransferase1 AT2G03220 60.846 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium164g00009 K13681 - gmx:100803305 986.097