Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15025g00001 ATGCTTATAGGTTGGATTCATATCTTTCCACGGAAGATGATGATGATGATGTTTGATGAGATGGGGTTTTGCAATGATTTGGATATTGTCACTGCGACCCTTGGAGAAGAAAATATTACCACTGGGCAAGCTGATCCAGAGGCCATAGTTGAGGATGATTTTAGTGATGAAGAAATTGGAGTTGATGAGCTTGATCACCGGATGTGGAAGGATAAAATGCTTCTCAAGAGATTGAAGGAGCAAAGTAAATCCAAAGAAGGAATCGATGCCGACAAGCAGAGGCAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCTAGGGCTCAAGATGGAATTTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGGAAACCAGTGACAGGAGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTGAGGTTTGATCGAAATGGACCTGCTGCTATAACAAAGTACCAGGCTGATAATGCTATCCCTGGAAGGAATGATGGATGCAATTCGATTGGTCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCTCCTCAGAGGAGGTTTCCCTTGGAGAAGGGTATTCCTCCACCATGGTGGCCCACAGGAAATGAAGTATGGTGGCCACAAATTGGTTTACCTAAAGATCAGAGTCCTCCTCCTTACAAGAAGCCCCATGACCTGAAGAAGGCATGGAAAGTTGGTGTTCTGACTGCAGTTATAAAGCACATGTCCCCAGATATTGCCAAAATTCGGAAGCTTGTGAGGCAGTCTAAGTGCCTTCAGGATAAGATGACAGCCAAGGAAAGTGCAACCTGGTTGGCAATCATCAATCAGGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATATTCCCCCATTAGCCTCAGGTGGAGGGAGTGGATCTTTGGTGGTCAATGATGGCAATGAATATGATGTTGAAGGGGGTGAGGATGAGCCTAATTTCGATGTAGAAGAGAGGAAACATGAGAATATTCACATGTCCAATCTGGGGATGGAGAGAATGAGGGGAACTATGGGTGTTCAGCAGCCCTCTTTTTCTATCAAGGGAGAGGCAGTTACAAATTTGGATCTTCTTAGGAAAAGGAAGGTCTCTAATGACTTTAACATGATGGATTTGAAGATTTACACATGTGAACAGCCTCAGTGCCCTTACAGTCAAGTTCAGCTTGGTTTCCCGGATAGAATATCTAGGGACAATCATAGGTTAATTTGTGCATTCAGAGGTCCTTCAGATTTTAGGGGTCCAAACTTTCATGTTAATGAGGTAAAGCCAGTGATATACCCCCAGTCCTTTGTTCCACCCAAGTCTACTGCTCAGTCTGCTAACATGGCCCCGTCTGTAATTGATCTCACTGGACTTGAAGTTTCAGAAGATGGCAAGAAAAGAATCAGCGACCTTATGACTAACTACGATACAAATGTACAGGGCAACAAGAATATGAGTTCATGTAATCGTGTAGCTGGCGAGGTTTTGAACCTTCAGCAGCATAACCTTCAGCAGCATCAACAGGACAACTTCATTCGCGGTCGAGGAATCACTATGGAAGGAAACGTCTTTGACGAAGCTACCATGTCAAATAATCATCACACTTTTGCAAGAGACGAATGCCAATTTGACCGGTTCAAAGCTTTGAATAGCACCTTTGAGACCAATCACAACAACAACAGTAACTTTCATTCCATGTTTGGGTCCTTTTGTGATCTGGCATCATTTGATTTCAAGGAGGATATGCAAGGAGTAGGAATGGATGCTCTTCAGAAACAGACAGATTTTTCTGTATGGTACCAGTGA 1902 0.4395 MLIGWIHIFPRKMMMMMFDEMGFCNDLDIVTATLGEENITTGQADPEAIVEDDFSDEEIGVDELDHRMWKDKMLLKRLKEQSKSKEGIDADKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEVWWPQIGLPKDQSPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASGGGSGSLVVNDGNEYDVEGGEDEPNFDVEERKHENIHMSNLGMERMRGTMGVQQPSFSIKGEAVTNLDLLRKRKVSNDFNMMDLKIYTCEQPQCPYSQVQLGFPDRISRDNHRLICAFRGPSDFRGPNFHVNEVKPVIYPQSFVPPKSTAQSANMAPSVIDLTGLEVSEDGKKRISDLMTNYDTNVQGNKNMSSCNRVAGEVLNLQQHNLQQHQQDNFIRGRGITMEGNVFDEATMSNNHHTFARDECQFDRFKALNSTFETNHNNNSNFHSMFGSFCDLASFDFKEDMQGVGMDALQKQTDFSVWYQ 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15025g00001 633 FunFam Ethylene insensitive 3-like 1 94 172 - -
Vium15025g00001 633 Pfam Ethylene insensitive 3 62 309 IPR047091 GO:0003700
Vium15025g00001 633 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 22 594 IPR006957 GO:0003700|GO:0005634
Vium15025g00001 633 FunFam Ethylene insensitive 3-like 1 182 319 - -
Vium15025g00001 633 MobiDBLite consensus disorder prediction 84 106 - -
Vium15025g00001 633 Gene3D - 186 319 IPR023278 GO:0003700|GO:0005634
Vium15025g00001 633 SUPERFAMILY DNA-binding domain of EIN3-like 188 312 IPR023278 GO:0003700|GO:0005634
Vium15025g00001 633 Gene3D - 94 171 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15025g00001 Vium-Chr15025 3583 7374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15025g00001 16 632 EIL Transcription Factor Family AT3G20770 58.243 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vium15025g00001 EIN3 2e-129 No_clan