Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12630g00001 ATGGTTTTCTGGATTGTTTTGGCTGAGGTAGCATATACTTTGATATTGCATATTTCTTACTTTGTTACGGTTTATTTTTTATTTCAGAGACGCACGGGAGAACCACTTCGTGTATATATGGATCTTGAAGCTGGCAGAAGAAGATCAGGTCAAGAGGATATATATATTAGTTATCATGCTGAAGATGATGTACAATCAACCTATGCTGGTGCACTCTTTCACAGTGGTCGAAACTACCACGTCTCCAGTGATAAAAACAGAGATATACTGGTTTATTGGTCTTCATCACGGTGTCTTTCTCAAAGGAATGAACTTGCCAAGAAGCTCCTGAGCTTATTGCCGCATCATTCATTTGGCAAGTGCCTAAATAATGTTGGTGGTCTAGACGCTGCTCTTTCTCTTTATCCCGAATGTGCAAACGATGCCAATGTTACCCCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCCATTGAGAACACTTTTACTGAGAGTTATGTAACAGAGAAGTTATTCTATGCCTTGGACTCTGGTGCAGTTCCAATCTATTTTGGTGCACCAAATGTCATGGATTTCGTTCCTCCACATTCAATCATAGATGGTAGAAAGTTCAAGTCATTGGAAGAGTTGGCCTCGTACGTGAAGGTAGTTGCTAACTACCCAGTTGCCTATGCGGAATACCATGCATGGAGAAGGTGTGGTGTGCTGGGAAACTATGGAAAAACCCGAGCCATGAGCCTTGACACATTGCCTTGCCGATTGTGTGAGGTTGTTAGCAGAAGAGGTGGAAGAAATGCAAGAAGATAG 828 0.4179 MVFWIVLAEVAYTLILHISYFVTVYFLFQRRTGEPLRVYMDLEAGRRRSGQEDIYISYHAEDDVQSTYAGALFHSGRNYHVSSDKNRDILVYWSSSRCLSQRNELAKKLLSLLPHHSFGKCLNNVGGLDAALSLYPECANDANVTPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSLEELASYVKVVANYPVAYAEYHAWRRCGVLGNYGKTRAMSLDTLPCRLCEVVSRRGGRNARR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12630g00001 275 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 16 267 - -
Vium12630g00001 275 Gene3D - 38 242 IPR038577 -
Vium12630g00001 275 FunFam Alpha-(1,4)-fucosyltransferase 37 243 - -
Vium12630g00001 275 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 32 267 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vium12630g00001 275 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 86 268 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12630g00001 21 273 Xyloglucan Fucosyltransferase1 AT1G71990 75.494 2.59e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12630g00001 K14412 - gmx:100792300 484.182