Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01611 ATGGCGTTATGGAAAAAGGAGACGAGAGAAGAAGCAAAGAAACAGCTATGGCTGGCAGGACCTATGATATTTCTTATATCTCTCATGTTTGTAGGTCATTTGGGTGAGATATATTTGGCTGCTGTATCTCTGTCTAGTTCACTTGTAAATTCTACTGGTTACAATGTCATGATGGGTCTATCAAGTGCATTGGACACATTCTGTGGTCAAGCATATGGAGCAAAACAGTATCACATGCTTGGTGTGCACACTCAAGGAGCCATGGTGGTTCTTATCCTTGTTACTATACCAGTGTCCATTATGTGGGTATACTTAGAGCCTATTCTTGAGCTTCTTCATCAGGACAAAGAAGTTGCAAAACTAGCTCAACTGTATGCTAGATATTTGATCCCAAGTCTTTCAGCCAATGCTCTTCTTCGATGCATTACTAAGTTCTTACAAACCCAAAACATAGTCTTTCCTATGGTGCTAGCCACTGGCCTTACTAGCTTGTTGCACTTGCTTCTCTGTTGGATTTTCATTCTAAAACTTGGTCTTGGTATCAAAGGATCTGCCATTGCAGTTTGCATATCAAATTGGTTTAACACCATAATCTTTGCACTTTACATTCGATTCTCCCCTTCGTGCAAACAAACTTGGACTGGTTTCTCCAAGGAATCTTTGCATATCATCCCAAAATTTCTCAAACTTGCATTTCCCTCAACAATCATGGTGTGGTAA 720 0.4014 MALWKKETREEAKKQLWLAGPMIFLISLMFVGHLGEIYLAAVSLSSSLVNSTGYNVMMGLSSALDTFCGQAYGAKQYHMLGVHTQGAMVVLILVTIPVSIMWVYLEPILELLHQDKEVAKLAQLYARYLIPSLSANALLRCITKFLQTQNIVFPMVLATGLTSLLHLLLCWIFILKLGLGIKGSAIAVCISNWFNTIIFALYIRFSPSCKQTWTGFSKESLHIIPKFLKLAFPSTIMVW 239
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01611 239 Pfam MatE 22 172 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vimu8g01611 239 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 237 - -
Vimu8g01611 239 NCBIfam MATE family efflux transporter 20 238 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu8g01611 Vimu-Chr8 21994980 21996952 Dispersed/Proximal
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03485 3 47735732 47738138 Vimu8g01611 8 21994980 21996952 ECH
Vimu8g01611 8 21994980 21996952 Vimu8g01611 8 21994980 21996952 ECH