Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04229 ATGAATCATTTTTCAATTCAGCTTGTGGCATTACTTTCACTCACGCTTTTGCTTCCAAATACGCATGGATGGGGAGATGATGGGCATGTCATTGTTTGCAAGATCGCCCAGGCTCGCCTGAGCAAAACTGCTGCAGAGGCTGTGCAAAAGCTGTTACCAAAATCTGCAGGAAACGATTTATCGACTAAGTGCTCGTGGGCAGATCATGTTCATCATATCTATCCCTGGTCCTCTGCTTTGCACTATGCAAATACTCCTGATGCCCCTCTACATTGTGGTTTTCTCTCCGATAGTGGAGGCAATACAATTAATGTTAAATGGTACACAAGGAAGCAAAATCTTCACCATGTTTGGGATCAAATCATACTTCAAACAGAAGTTGACAAATTTTATGACTCAGACATGGACGAGTTCGTCGATGCAATTCAACAGAATATTACGAAAGTATGGGCCAACGAAGTAGAAGAGTGGGAACACTGCGGTAACAATGATCTTCCATGCCCAGCTCAATATGCATCTGAAAGTAGCATAGATGCTTGTAAATGGGCATATAAAGATGCCACGGAAGGTTCAGTGCTAAATGATGATTACTTCCTGTCACGTTTACAAATAGTGAATTTGCGGTTAGCTCAAGCAGGAGTTCGTTTGGCTGCTATTCTTAATCGTGTTTTTGACAGAAAGCTTTCGTCGTCGATGTAG 699 0.4235 MNHFSIQLVALLSLTLLLPNTHGWGDDGHVIVCKIAQARLSKTAAEAVQKLLPKSAGNDLSTKCSWADHVHHIYPWSSALHYANTPDAPLHCGFLSDSGGNTINVKWYTRKQNLHHVWDQIILQTEVDKFYDSDMDEFVDAIQQNITKVWANEVEEWEHCGNNDLPCPAQYASESSIDACKWAYKDATEGSVLNDDYFLSRLQIVNLRLAQAGVRLAAILNRVFDRKLSSSM 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04229 232 CDD S1-P1_nuclease 24 224 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vimu7g04229 232 PANTHER ENDONUCLEASE 4 9 87 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vimu7g04229 232 Gene3D P1 Nuclease 24 88 IPR008947 GO:0016788
Vimu7g04229 232 Gene3D P1 Nuclease 89 229 IPR008947 GO:0016788
Vimu7g04229 232 Pfam S1/P1 Nuclease 24 87 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vimu7g04229 232 Pfam S1/P1 Nuclease 89 225 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vimu7g04229 232 SUPERFAMILY Phospholipase C/P1 nuclease 24 222 IPR008947 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04229 Vimu-Chr7 40929241 40934870 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04229 7 40929241 40934870 Vimu7g04229 7 40929241 40934870 ECH