Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04174 ATGTTGGAGAAATACTGGGCTCAATTCTACTCTCATATCAAATGGGTGTTTGATTTCCTTCTCTTTTACCCATTCTTTAAGCTCCATGATTCTCAAATGGCAATGATTGGAGAAGAGCAGAGCATATGCCGCTATGCACACAACCCTGGCACAGAGGAAGATGCTGATTGTGCTGTTTGTCTGTGCAAAATTGGAGATGGTGAAGAGATTAGGGTTCTTAGGTGTGAACATTTCTTTCACAGAAATTGCTTGGATGCATGGGCTGCTCTCAAAAACGCATCTTGCCCTCTTTGCAGAGAATCGATTAGGCCAAGAAGAACCCTCAATGAGGTTGGAGCTGAAGTTCTGTGGTTTGAATTTTGCTCTGTAAACACTAATGAGGGCGACAGATGGTGGCTTCGTTGA 405 0.4346 MLEKYWAQFYSHIKWVFDFLLFYPFFKLHDSQMAMIGEEQSICRYAHNPGTEEDADCAVCLCKIGDGEEIRVLRCEHFFHRNCLDAWAALKNASCPLCRESIRPRRTLNEVGAEVLWFEFCSVNTNEGDRWWLR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04174 134 SUPERFAMILY RING/U-box 50 108 - -
Vimu7g04174 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 106 IPR013083 -
Vimu7g04174 134 Pfam Ring finger domain 56 99 IPR001841 -
Vimu7g04174 134 PANTHER - 33 108 - -
Vimu7g04174 134 ProSiteProfiles Zinc finger RING-type profile. 57 99 IPR001841 -
Vimu7g04174 134 SMART ring_2 57 98 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04174 53 102 C3H Transcription Factor Family AT1G80400 48.000 1.55e-13 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04174 7 40393807 40394211 Vimu7g04174 7 40393807 40394211 ECH