Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04141 ATGGGTAAGAAGCTAGATGCTCTCCTTGGTAGAACCTTCAAGGCTGCAAAGTTTAAGGCTATTGTTAACCTTGCCATCTCACGTCTCGCTGTTCTCAAGAACCAGCGCCAGGCTCGCCTTAGACATGCACGTTCTGATGTCCTTGAACTCATCCAACTGGGTCACCTTGAACGTGCTTCACTTAGAGTTGAGCATGTGATCAAGGATCAGAACATGCTGGATGTGTATGACAGGATTGAAGGATACTGCAACCTCTTGATCGAAAGAGTCCACCTCATTGAACAAGAAAGGGAATGTCCCGAGGAACTGAAAGAGGCAGCGTCGGGGTTGCTCTATGCAGCATCAAGGTGTGGAGATTTTCCGGAGATTCAAGAGATTCGTGCCGTTTTGACCTCGCGGTTTGGCAAGGAGTTTGCTGCTCGTTCTATTGAGTTGAGGAACAACTGTGGAGTCCATCCTCAGATGATACAGAAGCTGTCAACAAGGATGCCAAGCATGGAAAGCAGAATGAAGGTACTCAAAGACATTGCTTCTGAGAATGGTATTGTTCTGCAGCTTGAAGTAACTGCTGTTTCAGTTGAGGAACAATCCGCAGTAGAATTGGAAAACCAGCATGGACCTGAGAAAGAGGAAGAGAATGAAAGCATTTTGCCTAGTAGAGGAAAAAATGAGGAGTTAACTGATTCCTTTAAGGGCAAAAAGAAGTACAAGGATGTAGCTGATGCAGCACAGGCAGCATTTGAGTCAGCAGCATATGCTGCTGTTGCTGCAAGAGCAGCATTGGAACTCTCCCGATCTGAGTCACATGATCCTGATGATCATGATAGTCCAGGCCCTCAAACAAGAAAAGTGGAGGATGGACATGATAATGCGAAACATCAAAGAGAAAATTTTAACAAGGATACAGATGAGTTAAAAGGGTCAAAAGACGTTATAAGTAGAAATTCAACAGATAAGGTTTTGATGGGGGCTAATGACTCAGTGGATGCTGAAATTGAGGGTGATCCTTTTGAAGAGGAAGTAGTTTTTGATGATAGTGATGATGAGACTGATAACAATCAGAATAAAAATGAATCTTCCAAGAAGGCATCTTCAAGTTATGGTGCTGGTATAGATGTCAATTCAGGTTCCAGGAAACTAGTATTAAATACAGTGTCAGAATCCAAGATGCAGGGTGTGCCTCAGTTGGATTTGCATAAGAGGCCAATTTCAGTGAGGTCTAGATGA 1227 0.436 MGKKLDALLGRTFKAAKFKAIVNLAISRLAVLKNQRQARLRHARSDVLELIQLGHLERASLRVEHVIKDQNMLDVYDRIEGYCNLLIERVHLIEQERECPEELKEAASGLLYAASRCGDFPEIQEIRAVLTSRFGKEFAARSIELRNNCGVHPQMIQKLSTRMPSMESRMKVLKDIASENGIVLQLEVTAVSVEEQSAVELENQHGPEKEEENESILPSRGKNEELTDSFKGKKKYKDVADAAQAAFESAAYAAVAARAALELSRSESHDPDDHDSPGPQTRKVEDGHDNAKHQRENFNKDTDELKGSKDVISRNSTDKVLMGANDSVDAEIEGDPFEEEVVFDDSDDETDNNQNKNESSKKASSSYGAGIDVNSGSRKLVLNTVSESKMQGVPQLDLHKRPISVRSR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04141 408 MobiDBLite consensus disorder prediction 201 234 - -
Vimu7g04141 408 FunFam Vacuolar protein sorting-associated protein IST1 9 191 - -
Vimu7g04141 408 MobiDBLite consensus disorder prediction 263 313 - -
Vimu7g04141 408 MobiDBLite consensus disorder prediction 263 408 - -
Vimu7g04141 408 Pfam Regulator of Vps4 activity in the MVB pathway 19 182 IPR005061 GO:0015031
Vimu7g04141 408 Gene3D - 6 192 IPR042277 -
Vimu7g04141 408 MobiDBLite consensus disorder prediction 199 234 - -
Vimu7g04141 408 MobiDBLite consensus disorder prediction 331 348 - -
Vimu7g04141 408 PANTHER IST1 FAMILY MEMBER 15 351 IPR005061 GO:0015031
Vimu7g04141 408 MobiDBLite consensus disorder prediction 357 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04141 Vimu-Chr7 40051372 40053092 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04141 7 40051372 40053092 Vimu7g04141 7 40051372 40053092 ECH